LOCUS BC051799 5251 bp mRNA linear HUM 05-MAY-2003 DEFINITION Homo sapiens sterol regulatory element binding transcription factor 2, mRNA (cDNA clone IMAGE:5498684), partial cds. ACCESSION BC051799 VERSION BC051799.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5251) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5251) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: f Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759169. FEATURES Location/Qualifiers source 1..5251 /db_xref="H-InvDB:HIT000099414" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5498684" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..5251 /gene="SREBF2" /gene_synonym="SREBP2" /db_xref="GeneID:6721" /db_xref="MIM:600481" CDS <1..3584 /gene="SREBF2" /gene_synonym="SREBP2" /codon_start=3 /product="SREBF2 protein" /protein_id="AAH51799.1" /db_xref="GeneID:6721" /db_xref="MIM:600481" /translation="GARAQRKHGGGWHPSVRRCRAGVVGCHGRWRRHRPRVSLSGTAG GASALSRAMDDSGELGGLETMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQL CSSFPGSGGSGSSSGSSGSSSSSSNGRGSSSGAVDPSVQRSFTQVTLPSFSPSAASPQ APTLQVKVSPTSVPTTPRATPILQPRPQPQPQPQTQLQQQTVMITPTFSTTPQTRIIQ QPLIYQNAATSFQVLQPQVQSLVTSSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLA PATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQ TAALQVPTLVGSSGTILTTMPVMMGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEK RYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLAN QKNKLLKGIDLGSLVDNEVDLKIEDFNQNVLLMSPPASDSGSQAGFSPYSIDSEPGSP LLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCLSFNPLTSLLQWGGAHDSDQHPH SGSGRSVLSFESGSGGWFDWMMPTLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSV TFWRHRKQADLDLARGDFAAAAGNLQTCLAVLGRALPTSRLDLACSLSWNVIRYSLQK LRLVRWLLKKVFQCRRATPATEAGFEDEAKTSARDAALAYHRLHQLHITGKLPAGSAC SDVHMALCAVNLAECAEEKIPPSTLVEIHLTAAMGLKTRCGGKLGFLASYFLSRAQSL CGPEHSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQRNPADPIAQVHQAFC KNLLERAIESLVKPQAKKKAGDQEEESCEFSSALEYLKLLHSFVDSVGVMSPPLSRSS VLKSALGPDIICRWWTSAITVAISWLQGDDAAVRSHFTKVERIPKALEVTESPLVKAI FHACRAMHASLPGKADGQQSSFCHCERASGHLWSSLNVSGATSDPALNHVVQLLTCDL LLSLRTALWQKQASASQAVGETYHASGAELAGFQRDLGSLRRLAHSFRPAYRKVFLHE ATVRLMAGASPTRTHQLLEHSLRRRTTQSTKHGEVDAWPGQRERATAILLACRHLPLS FLSSPGQRAVLLAEAARTLEKVGDRRSCNDCQQMIVKLGGGTAIAAS" BASE COUNT 1077 a 1585 c 1460 g 1129 t ORIGIN 1 gcggcgcccg ggcgcaacgc aaacatggcg gcgggtggca cccgtcggtg aggcggtgcc 61 gggcgggggt tgtcgggtgt catgggcggt ggcgacggca ccgcccccgc gtctccctga 121 gcgggacggc agggggggct tctgcgctga gccgggcgat ggacgacagc ggcgagctgg 181 gtggtctgga gaccatggag accctcacgg agctgggcga cgagctgacc ctgggagaca 241 tcgacgagat gctgcaattt gtcagtaatc aagtgggaga gttccctgac ttgttttcag 301 aacagctgtg tagctccttt cctggcagtg gtggtagtgg tagcagcagc ggcagcagtg 361 gcagcagcag cagcagcagc aatggcaggg gcagcagcag cggagctgtg gacccttcag 421 tgcaacggtc attcacccag gtcacattac cttccttctc tccctcggcg gcctccccac 481 aggctccaac tctgcaagtc aaggtttctc ccacctcagt tcccaccaca cccagggcaa 541 ctcctattct tcagccccgc ccccagcccc agcctcaacc tcaaactcag ctgcaacaac 601 agacggtaat gatcacgcca acattcagca ccactccgca gacgaggatc atccagcagc 661 ctttgatata ccagaatgca gctactagct ttcaagtcct tcagcctcaa gtccaaagcc 721 tggtgacatc ctcccaggta cagccggtca ccattcagca gcaggtgcag acagtacagg 781 cccagcgggt gctgacacaa acggccaatg gcacgctgca gacccttgcc ccggctacgg 841 tgcagacagt tgctgcgcca caggtgcagc aggtcccggt cctggtccag cctcagatca 901 tcaagacaga ttcccttgtt ttgaccacac tgaagacaga tggcagccct gttatggctg 961 cggtccagaa cccggccctc accgccctca ccacccctat ccagacggct gcccttcaag 1021 taccaaccct ggtgggcagc agtgggacca ttctgaccac aatgcctgta atgatggggc 1081 aagagaaagt gcccattaag caggtacctg ggggagtcaa gcagcttgag ccccccaaag 1141 aaggagaaag gcggacaacc cataatatca ttgagaaacg atatcgctcc tccatcaatg 1201 acaaaatcat cgaattgaaa gacctggtca tggggacaga cgccaagatg cacaagtctg 1261 gcgttctgag gaaggccatt gattacatca aatacttgca gcaggtcaat cataaactgc 1321 gccaggagaa catggtgctg aagctggcaa atcaaaagaa caagcttcta aagggcatcg 1381 acctaggcag tctggtggac aatgaggtgg acctgaagat cgaggacttt aatcagaatg 1441 tccttctgat gtccccccca gcctctgact cagggtccca ggctggcttc tctccctact 1501 ccattgactc tgagccagga agccctctat tggatgatgc aaaggtcaaa gatgagccag 1561 actctcctcc tgtggcgctg ggcatggtag accgctcacg gattcttctg tgtgtcctca 1621 ccttcctgtg cctctccttt aaccccctga cttccctgct gcagtgggga ggggcccacg 1681 actctgacca gcacccacac tcaggctctg gccgcagtgt cctgtcattc gagtcaggtt 1741 ctgggggctg gtttgactgg atgatgccta ctcttctctt atggctggta aatggtgtga 1801 ttgtcctgag cgtctttgtg aagctgctgg ttcatgggga gccagtgatc cggccacact 1861 cgcgctcctc ggtcaccttc tggaggcacc ggaaacaggc agatctggat ctcgccagag 1921 gagattttgc agctgctgcc ggcaacctac aaacctgcct ggcagttttg ggccgggcac 1981 tgcccacctc ccgcctggac ctggcctgca gcctctcctg gaacgtgatc cgctacagcc 2041 tgcagaagct acgcctggtg cgctggctgc tcaagaaagt cttccagtgc cggcgggcca 2101 cgccagccac tgaggcaggc tttgaagacg aagctaagac cagcgcccgg gatgcggctc 2161 tggcctatca ccggctgcac cagctgcaca tcacagggaa gcttcctgca ggatccgcct 2221 gttccgatgt acacatggcg ttgtgtgccg tgaacctggc tgaatgtgca gaggagaaga 2281 tcccaccgag cacactggtt gagatccatc tgactgctgc catggggctc aagacccggt 2341 gtggaggcaa gctgggcttc ctggccagct acttcctcag ccgagcccag agcctgtgtg 2401 gccccgagca cagtgctgtt cctgactccc tgcgctggct ctgccacccc ctgggccaga 2461 agtttttcat ggagcggagc tggtctgtga agtcagctgc caaggagagt ctatactgtg 2521 cccagaggaa cccagctgac cccattgcgc aggtccacca ggccttctgc aagaacctgc 2581 tggagcgagc tatagagtcc ttggtgaaac ctcaggccaa gaagaaggct ggagaccagg 2641 aagaagagag ctgtgaattc tccagtgctc tggagtactt gaaattactt cattcttttg 2701 tggactctgt gggggttatg agccccccac tctccaggag ctccgtgctc aagtccgccc 2761 tgggtccaga catcatctgt cggtggtgga cgtctgcaat cactgtggcc atcagctggc 2821 tccagggaga cgatgcagct gtgcgctctc attttaccaa agtggaacgc atccccaagg 2881 ccctggaagt gacagagagc cccctggtga aggccatctt ccatgcctgc agagccatgc 2941 atgcctcact ccctgggaaa gcagatgggc agcagagttc cttctgccat tgcgagaggg 3001 ccagtggcca cctatggagc agcctcaacg tcagtggggc cacctctgac cctgccctca 3061 accacgtggt ccagctgctc acctgtgacc tgctactgtc gctacggaca gcgctctggc 3121 aaaaacaggc cagtgccagc caggctgtgg gggagaccta ccacgcgtca ggcgctgaac 3181 tggcgggctt ccaacgggac ctgggcagcc tgcgcaggct ggcacacagc ttccgcccag 3241 cataccgcaa ggtgttcctg catgaagcca ccgtgcgcct gatggcagga gccagcccca 3301 cccgcaccca ccagctgctg gaacacagcc tgcggcggcg caccacgcag agcaccaagc 3361 acggagaggt ggatgcctgg cccggccagc gagagcgggc caccgccatc ctgctggcct 3421 gccgccacct gcccctctcc ttcctctcct ccccgggcca gcgggcagtg ctgctggccg 3481 aagctgcccg caccctggag aaggtgggcg accggcgctc ctgcaacgac tgccagcaga 3541 tgattgttaa gctgggtggt ggcactgcca ttgccgcctc ctgaccacca ggctcagccc 3601 acccctccac ctctctctcg atttctctct ctccccctca gcatcttccc gctgagagtg 3661 gtggggagga gccttgtctt cttagctgtc acctgccgag gcttctgggc cactcaggcc 3721 agtgcacccc tgggcagagc cccttaaagc tgctgtcact agatgcccat ggtccagggc 3781 ctggtgggcg tgagaggata ggtggcaggg cagaaactgg gcagccctga cttgatagca 3841 gcagggggag ctcccaagct gccaagcccc tgcctccagc cttcctgagt ttctctctcc 3901 tgaaccctac tctctccttt ttgcttcctc agtttttatc aggctttctc tgggggacag 3961 cagtctctga gcaccaggga gcagttgccc tcaggcctgt gcccagcatg ccctcccctt 4021 tttatacgaa tgttttctac cagtgtgctt gggtttgcca tgatgcgagg ctgagttgct 4081 gtagcgtctt gattctctcc ctgggtctgc gttccctccc ctgggcctga ctgagcctgc 4141 tcattgtttt tccctttatt acacaggaca gccaggggag gaggggggcc cagccctggg 4201 aggctggtgg gaggcaggtg ggaggcaggg ggcaggcctg cggatgcatg aaataatgtt 4261 ggcattattt tttaattttt taaaaaataa atggtatctt atttaattgt cctgttcctt 4321 cccactcccc gcctcctagg atgttagccc aagctcaggg taggcccagg gggctgggag 4381 aaatgaagcc acccgtgggg actggggacc aggggccttc agcatggctt ctaggttccc 4441 tcctccccct accccatctc ctacctccac agtacagact gtccccaact taacagtggt 4501 tcaacttaaa ccatgtttca actttacaat tggtctgttg gggtattaaa tgaatttgtg 4561 acttaggata ttttcattta tgatgggttt atcaggaagt aaccccatgg taagttgagg 4621 catatctgta tatatttaaa cctaattaat tcttgagctg aaaataaata aaccaggatg 4681 gcagggacca acccctaatc cctccccagc ggcaagcccc tcttttcaga gtgggcagag 4741 ggttgcctat ggtgggcact aggaatgagg tcccctgcct cgatgcgggt cctaggagaa 4801 aaagtcctac ttttctgggt ccccaggtgc agcacctccc agagactgtt tctcccatgg 4861 cctcctgagt gatgggccct gcctccctgt gcctcatcct caggctggtt ggagcagagg 4921 gtgggcagga gccccagcac agactggggg gtgctcacag cagggccacc ttgatgcagg 4981 ctggaatgtt atccctgggg tgtgcttgga ccccacctgc tttctttctc tcctgcccct 5041 cccctactct cactgtaatt tatggaccct gcccgcctgc gtgttgtgtg tatgtcctgt 5101 gccttttctc actattgttt gggtgtggga gggggtggtt tttcactgaa aaggggggta 5161 cacctatagc tttcttgatg ttcaatcagt cactgtgtcc cagacatatt caataaacac 5221 agattggtac cacccaaaaa aaaaaaaaaa a //