LOCUS BC051794 5960 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 20, member B, mRNA
(cDNA clone MGC:57628 IMAGE:5492043), complete cds.
ACCESSION BC051794
VERSION BC051794.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281529.
FEATURES Location/Qualifiers
source 1..5960
/db_xref="H-InvDB:HIT000053684"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57628 IMAGE:5492043"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5960
/gene="FAM20B"
/db_xref="GeneID:9917"
/db_xref="HGNC:HGNC:23017"
CDS 294..1523
/gene="FAM20B"
/codon_start=1
/product="family with sequence similarity 20, member B"
/protein_id="AAH51794.1"
/db_xref="GeneID:9917"
/db_xref="HGNC:HGNC:23017"
/translation="MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRM
MTGLRVELAPKLDHTLQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVG
YKGTQLKALLILEGGQKVVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH
RAPLVVGRFVNLRTEIKPVATEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIME
GSVTLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDII
DTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLDERSILAPLYQCCII
RVSTWNRLNYLKNGVLKSALKSAMAHDPISPVLSDPHLDAVDQRLLSVLATVKQCTDQ
FGMDTVLVEDRMPLSHL"
BASE COUNT 1690 a 1215 c 1394 g 1661 t
ORIGIN
1 ggccgggccg ggggtgggcc ggagccgctg tggcggcggc ggcggctggg ggcggtgagc
61 gcggcgtggg gctgcccctc cccggaggcg gcgggggcgg ccggggccgc gccgcaccgc
121 accgcgcggg cggccatgga gcgagcctag ggcccgacag gaactgtgga aggtgcatca
181 gtgaagaaat ggaccaatgt gtataatcat ggaatctcct tgctaaccat caccaccagc
241 tctccttaat acatgagcaa gagtgggtca ggggagaagg aaaagaggtc aacatgaagc
301 taaagcagcg agtcgtgctg ttagcaattc tccttgtcat ttttatcttc accaaagttt
361 tcctgattga caacttagat acatcagctg ccaaccggga ggaccagagg gcctttcacc
421 gaatgatgac tggcttgcgg gtggagctgg cacccaagct ggaccatacc ttgcagtctc
481 cctgggagat tgcagcccag tgggtggttc cccgggaagt gtaccctgaa gagacaccag
541 agctgggggc agtcatgcat gccatggcca ccaagaaaat cattaaagct gatgtgggtt
601 ataaagggac acagctgaaa gccttactga tacttgaagg aggccagaaa gttgttttca
661 aacctaagcg gtatagccga gaccatgtgg tggaagggga accgtatgct ggttatgata
721 gacacaatgc agaggtagca gcctttcact tggacaggat tctgggtttc caccgagccc
781 ccttggtagt tggcagattt gttaatcttc ggacagagat caaacctgtc gccacagagc
841 agctgttgag caccttccta actgtaggaa acaatacttg tttttatggg aagtgctatt
901 actgccgaga aacagaacca gcttgtgctg atggagacat aatggaggga tctgtcacac
961 tttggcttcc agatgtgtgg cctctgcaga agcaccgtca cccatggggc aggacttacc
1021 gagaaggcaa attggccagg tgggagtatg atgagagcta ctgtgatgct gtgaagaaaa
1081 cgtcccctta tgactctggc ccgcgcctct tggacatcat tgacacagct gtctttgatt
1141 acctgattgg caatgctgac cgccatcact atgagagctt tcaagatgat gaaggcgcta
1201 gtatgctcat ccttcttgat aatgccaaaa gctttgggaa cccctcgctg gatgaaagaa
1261 gcattcttgc ccctctctat cagtgttgca ttattcgggt gtccacctgg aacagactga
1321 actacctaaa gaatggtgtg ctaaagtctg ccttaaaatc tgccatggcc catgacccca
1381 tctccccagt gctctctgat cctcatctgg acgccgtgga ccagcggctc ctgagtgtcc
1441 tggccaccgt gaagcagtgc accgaccagt ttgggatgga cacagtactg gtggaagaca
1501 ggatgcctct ctcacacttg taattttcga cacaaaataa gtgaaacttc tttttacaaa
1561 gatagagaaa cagcacaatc aattccaaat ggtatgagat ggattggaag tggccagcag
1621 caagttctgg tgacgggaca gagtggcctt ggatgtcttt ggtattttct gtagtagaaa
1681 ctaaagcaaa gaccacaagt ttcagagcat ggagacattc ctgctgaatc gccttctcac
1741 ctcctcggca attgctcatt ctagggttgg gcatcatagt tggtcagtct taattcccat
1801 gccaaaggac aaacaggtgt gacatttgga tagatgaata ctgggattgg ctctggagca
1861 tgtgttttga gttgaacctt gcagtccttt ctctacgccc gtggattttg tggaaacact
1921 ttgcaatctc tttgtctttt ttttttttac cagaactagt tacattggaa tgcttactgt
1981 cctacagagt ggcagcaaat aaaaccttgc attccatcaa gccaaaatag cacactctgt
2041 tagaggagat acatgtttaa gatagaattg gagggaagga caaaaacaga aaaatgtttg
2101 ggcttttaag ccattgggta gtattgtttt gatgatctta gaggagggaa gaagagagag
2161 agacccaatg gtagaaccag aatcagggag atgactgaac tactgaaaaa caggttccct
2221 tgtatttagg atcttaaggt gtataaaaag caaacatgac tttgcaccta agtaaattct
2281 gcattctcat agttgtgtcc caattaacca aaaagttgtc tctagagaaa atactattac
2341 aatctaagca tgattctctg tggagactaa ttttttcccc ttttgccaaa agcagtcctt
2401 cccaaattaa caaagcaaac tgaaataata ccttgaataa caggttgcct gtggtctctg
2461 tcatcctcgt ttctcttctg aaatgaattt ccacctctgc ctttaaggca tttttgtcac
2521 tgaagctgct gttcccaaga gatcggcaac ctttttgtcc ctttctcata agaaagggac
2581 actcctacag gtgagagtgt ataccttact ctctcagata agtggctgga cttatcttgt
2641 gatttggggc catggaagat tggaaacaaa gattttaagc cttcttcttt ttttcttttt
2701 tctttttttt ttgagaccaa gtctcactct gttgcccagg ctggagtgca gtggcacgat
2761 cttggcttac tgcaacctcc gtctcccggg ttcaagcgat tctcttgcct cagcctccag
2821 agtagctggg attacaggcg cccgccatcg tgcccagcta atttttatat ttttagtgga
2881 gacagggttt cgggtttcac catgttggcc aggttgatct tggactcctg accccaggtg
2941 atccgcctgc ctcagccttc caaagtgctg ggattacagg catgagccac cgtggccggc
3001 caagatttta agccttctga gccttgaaat tgaggaggtt aaaaggaaga gccttaagat
3061 tttgatttat gtcaaatcct aattctatca ttcagtcttg tttggagttc tgaacccatg
3121 atgttgtatt atgcttcttt ctcctcttag cactctcaaa tttcaggttt gtaaaacaca
3181 gtttttgttt tgtgttctgg caaagtgatc tcaacatgta agtagttgca gtaaaacaca
3241 ggggcaaagg aagacaggcc tgatgtgccc actcatctat ggactcagag ctgtgtgctt
3301 tgctcctgca tcttgttgag gtgctgttcc agctttgcat ttctgtcaag tagaggcgaa
3361 tatataaaca gtgtggttga atacatttaa tgccagccat tggaaactag ttttaggcaa
3421 ccactctcaa aaacagcttt agaatttatg cccagttttc ttgcattgaa agataactga
3481 gtaataacct gtaactattt ttaaatggca tgaaattagg aaacttttgt acattttata
3541 tacattttga gatgaacaga acaatgggct gagttataaa aagcgtgtat tgaatttaag
3601 aagacagact agcacaaaac acagaattcg tgttaaccaa aggaggcatt gatttcagtt
3661 ttaaggctac tcagtgttgt gtgtccaggg aaattcacag ctcagtatga gaataccttg
3721 gttagtgctc acccacaagc ttccaggagc cagctgggag gagacaatag gaagagatgt
3781 catctctgct ctccctgtaa atgttagttg aactaagtta tggatttgtg gtctttcaaa
3841 tacatgacgc ctttagtatg ccacactgaa atgaataaga agtcttctga aactgggaac
3901 ttcataacat tgaaggcaga agattctgct aaggaaaaaa gcaggcagga aagaaaatgt
3961 ctcatccttt cttgaaagca tttgcagaaa atatatcatt tcattttatt cccatctgtt
4021 ttcaaactcg tgatcttaaa aggcattctg atgataaatt tagaattttc atctataaaa
4081 tttagaactc taatccataa agttagaatt gagctaatag agtggtatga catggcacta
4141 aaaatataaa tttttgttgt aagtcaggat tggagtaagc tggaaaagta tgtttaggca
4201 aatcttggag aaaaccaacc ataaacttac agctctaaaa ttcagaaagc cctaaaattt
4261 caaacactgt ttgaaagaag aggtgggggc cgggtgccgt ggctcatgcc tgtcatccca
4321 gcatttggga ggctgaggca ggcggatcgc ctggggccag gagttcgaga ccagcctggc
4381 tggctagcat ggtgagaccg tctctactaa aaatgcaaaa attgacaggg cacggtggcg
4441 tgcgcctgtg gtcccagctg ctcgggaggc tgaggcagga gagtcgcttg aatccgggag
4501 gcgaaggttg cagtgagctg agattgtgct gctgcactcc agcctgggag acagagcgag
4561 actctgtctt aaaaaaaaaa aaaggaggtg aatttttttt taagttttgt aacactgtcc
4621 tactttattt attagaatct aaggctgtta caatcaagtc gttgcagggt ttggatcagc
4681 tgtaagttag gtatgcctac caaacatcca aaggtagacg tggagacatt ttaatactac
4741 aaaactagga aaatcagaac tcatggccat ttcctgccct cctccaactt gttaaaacat
4801 gtttattcta aagttcgaat ggataaattt gagtataaag gttttgttat aaaactgttc
4861 tttagtgtaa ggctgcattg tgggtttggg ggaaatgtaa ataattttct gtgtaaaaca
4921 aattcatagg atctgatttg ctcagagtat tattcaagaa tgtattaata aggcattgcc
4981 ccctgtttgc actcagggtt aatatgtcaa atgaaattta agaaggaaat ggaagaattc
5041 aggtacatta attgcatatt attttgggaa agatgagtcc tatacgtggc aatttttcaa
5101 tgtcatctga agccagcatt atcttccaaa gaaatcgatc ttttttttct aaaaaaaaaa
5161 aaatgctttt gccttccctt cccttcccat ccgccatatt tcttcagcct ttcttctcga
5221 tcacccgtgt attctttgac cagtaaatga ccacacctca atgatggtaa aacagcatca
5281 tcagtaagct atcttatatg cctcatcctg tgagtttgag cttcaggaaa catgagtaaa
5341 agtatatgta atgtatatag tcgtatatgt attctagcaa gaaaaacata tttattttga
5401 caaaggggaa cactgacttt ctgaaggatt cagaaagaac cttagtgaaa ggttctcagt
5461 ctctgagagt ggaccctaat taacataaag accattcatc agcgaataac tactgagcaa
5521 ctctagtgtg ccagcacagg ccagacatac tagtgagcca ggcacatctg gccttgggaa
5581 actcatccta caggggaagg ccagtttttt tcccttcaat tcctcaagtc tgggtggtga
5641 caaggtaggg gctaggtact ggactaccac aggtttttag gaactaaggt gtttctcata
5701 aacacaaaat gttgggtgaa actgggaaca actactcaga agctcattta tttgcttaaa
5761 tggaaagtgt gggagccact accctctctt ttgatctgcc aaggatttcc tctcagagct
5821 gttgcacaga cagagattgt acttggtaag ataccaaaca agacagatat ggatctaaat
5881 ttctaatgtg ttctatgggt ttcaattctg aaaaaagaaa atgaataaag attttaataa
5941 ataaaaaaaa aaaaaaaaaa
//