LOCUS BC051751 4901 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens replication factor C (activator 1) 1, 145kDa, mRNA
(cDNA clone MGC:51786 IMAGE:6070144), complete cds.
ACCESSION BC051751
VERSION BC051751.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4901)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4901)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32528305.
FEATURES Location/Qualifiers
source 1..4901
/db_xref="H-InvDB:HIT000053669"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51786 IMAGE:6070144"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4901
/gene="RFC1"
/gene_synonym="A1"
/gene_synonym="MGC51786"
/gene_synonym="MHCBFB"
/gene_synonym="PO-GA"
/gene_synonym="RECC1"
/gene_synonym="RFC"
/gene_synonym="RFC140"
/db_xref="GeneID:5981"
/db_xref="HGNC:HGNC:9969"
/db_xref="MIM:102579"
CDS 111..3554
/gene="RFC1"
/gene_synonym="A1"
/gene_synonym="MGC51786"
/gene_synonym="MHCBFB"
/gene_synonym="PO-GA"
/gene_synonym="RECC1"
/gene_synonym="RFC"
/gene_synonym="RFC140"
/codon_start=1
/product="replication factor C (activator 1) 1, 145kDa"
/protein_id="AAH51751.1"
/db_xref="GeneID:5981"
/db_xref="HGNC:HGNC:9969"
/db_xref="MIM:102579"
/translation="MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIK
VNSSRKEDDFKQKQPSKKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQD
PVTYISETDEEDDFMCKKAASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKL
TPTSVLDYFGTGSVQRSNKKMVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQ
LHEDEEFARTLAMLDEEPKTKKARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVS
DERKSYSPRKQSKYESSKESQQHSKSSADKIGEVSSPKASSKLAIMKRKEESSYKEIE
PVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPEDSEKKRTNYQAYRSYLNREGPK
ALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVM
GRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAVETEMKKESKLERTPQ
KNVQGKRKISPSKKESESKKSRPTSKRDSLAKTIKKETDVFWKSLDFKEQVAEETSGD
SKARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSE
DKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSK
SSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI
KHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPA
MNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVARKVFA
AGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSI
CDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPSWLGKHSSTGKHD
RIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDVVALMDTYYLM
KEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIKASRHSTSP
SLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKGKGKSSK
K"
BASE COUNT 1671 a 917 c 1105 g 1208 t
ORIGIN
1 cttgcacttc gcgggagaag ttgttggcgc gaatggatcc tgagcctcga taacagattc
61 ctcaaccggc ccacccgcca gccagccagc gccttcatcc tggggctgcg atggacattc
121 ggaaattctt tggagtaata ccaagtggaa agaaacttgt aagtgaaaca gtaaagaaga
181 atgagaaaac aaagtctgat gaagaaactt taaaagcaaa gaaaggaata aaggaaatca
241 aggtaaatag ctcccgtaaa gaggatgact tcaaacaaaa gcaaccaagc aagaaaaaga
301 ggatcatcta tgattcagat tcagagtcag aggagacgtt gcaggtaaaa aatgccaaaa
361 agccaccaga aaaactgcca gtatcttcta aacctggtaa aatttcacgg caggatcctg
421 ttacatacat ttcagaaaca gatgaagaag atgactttat gtgtaagaag gcggcctcta
481 aatcaaaaga gaatggaaga tctacaaata gtcatcttgg aacatcaaac atgaaaaaga
541 atgaagaaaa cactaagacc aagaataagc ctttatcacc aataaaactt acacccacat
601 cagtacttga ttattttgga actggaagtg tccaaagatc taataagaag atggtggcaa
661 gcaaaagaaa agagctttca caaaatacag atgagtctgg attaaatgat gaagccatcg
721 ccaagcaatt acagcttgat gaagatgcgg agctggagag gcagttgcat gaagatgaag
781 agtttgccag aacattagcc atgttggatg aagaacccaa gaccaaaaag gctcgaaagg
841 acacagaagc gggagaaacg ttttcatctg tccaagccaa tttaagtaaa gcagaaaaac
901 ataaatatcc tcataaagta aaaacagcac aagtttcaga tgaaagaaag agctacagtc
961 ctaggaagca aagtaaatat gaaagttcaa aagaatctca gcaacattcc aagtcatcag
1021 ctgacaaaat aggagaagtc tcttctccca aggccagttc taagctggca attatgaaaa
1081 gaaaagaaga gagctcttat aaagaaatag agcctgtggc ctcaaaaaga aaagaaaatg
1141 ccattaaatt gaaaggagag acaaaaactc ctaagaaaac caaaagttct ccagctaaaa
1201 aagagtctgt aagtcctgaa gattctgaaa agaaacgcac taattatcaa gcttatcgaa
1261 gctacttaaa tcgagaaggt cccaaggctc tgggctccaa agaaatacca aagggagctg
1321 aaaattgctt ggaaggcctt atatttgtaa tcacaggcgt gctggagtct attgaacgag
1381 atgaggccaa gtctctaatt gaacgttatg ggggaaaagt aacaggaaat gtcagcaaga
1441 aaacaaatta tcttgtcatg ggtcgtgata gtggacagtc caagagtgat aaggccgcag
1501 ccttggggac aaaaattatt gatgaagatg gcctgttgaa tctgattcgg actatgccag
1561 gcaagaaatc caagtatgaa atagcagttg aaactgagat gaagaaagag tccaaactgg
1621 agagaacacc ccaaaaaaat gtccaaggaa aaagaaaaat tagtccatct aaaaaggaat
1681 cagaatctaa aaagagcagg ccgacttcca aaagggacag tttggcaaag acaataaaaa
1741 aggaaacaga tgtgttttgg aaaagcctgg atttcaagga gcaggtggct gaggagacaa
1801 gtggtgacag caaggctagg aatttggctg atgacagcag tgaaaacaaa gtggaaaatt
1861 tgctctgggt ggataaatat aagccaacct cgctcaagac cataattgga cagcaaggtg
1921 accagagctg tgccaacaaa ctcctacgct ggctccgaaa ctggcaaaag agttcttccg
1981 aagataaaaa acacgcaaag tttggtaaat tttccggcaa agatgatggc tctagtttta
2041 aagcagcgtt gctgtcaggc cctcctggtg ttggcaaaac caccacagct tccctggtgt
2101 gtcaggagtt gggatacagc tacgtggaac tgaatgcaag tgacacccgg agtaagagca
2161 gtttgaaggc gattgttgct gagtcactga acaataccag catcaaaggc ttttattcaa
2221 atggagcagc ctcttcagta agcacgaaac atgctctcat catggatgaa gtagatggca
2281 tggcaggcaa tgaggatagg ggaggaattc aggaattaat tggcctgata aaacatacta
2341 aaattcccat tatttgtatg tgcaatgata gaaatcatcc caagattcgc tctctggttc
2401 attattgttt tgatcttcgt tttcaaagac ctcgggttga acagattaag ggtgctatga
2461 tgtctattgc atttaaagaa ggtttaaaga ttccccctcc agctatgaat gaaataattt
2521 tgggagccaa tcaagatatc agacaggttt tacataatct gagtatgtgg tgtgcacgaa
2581 gtaaagcatt aacctatgac caggccaaag ctgattctca cagagccaaa aaggatatca
2641 aaatgggccc atttgatgtt gcccggaaag tgtttgcagc tggagaggag actgctcaca
2701 tgtcacttgt ggacaagtca gatctctttt ttcatgatta ttcaatagca cccctcttcg
2761 tccaggaaaa ttacatacac gtgaagcctg tagcagcagg gggtgacatg aaaaagcacc
2821 tgatgctttt aagcagagca gcagacagca tatgcgatgg tgacctagtg gacagccaga
2881 tccggagtaa gcaaaactgg agtcttctgc ctgcgcaggc catttatgcc agtgttcttc
2941 ctggagagtt gatgaggggg tacatgaccc agtttcccac cttcccaagc tggctgggga
3001 agcactcgtc tacaggcaaa catgatcgta ttgttcagga cctggccttg catatgagtc
3061 tcagaactta ctccagcaaa aggactgtaa acatggatta tctgtcgctt ctaagggatg
3121 cacttgtaca gcccttgacc tcacaaggag tagacggagt acaggatgtt gttgcactta
3181 tggacacata ttatttgatg aaagaagact ttgagaatat catggaaatc agcagctggg
3241 gtggcaaacc tagtcccttt tcaaagctgg atcccaaggt gaaagcagcc ttcacaagag
3301 cttacaataa ggaagcccac cttactccat actcacttca agctataaag gcatctagac
3361 acagcacaag cccatccctg gattcggaat acaatgaaga attaaatgaa gatgactctc
3421 aatctgatga gaaagaccaa gatgctatag aaactgatgc catgatcaag aaaaagacaa
3481 aatcttcaaa gccttcaaaa ccagaaaaag ataaggagcc cagaaaagga aaaggaaaaa
3541 gttcgaagaa atgaaaccat ttttcactag cgacagccac tttttactct ccctcctgac
3601 cagtccagct ggtctagaga aagccttgtt ttttcccaga gcaaccatgt tttagcataa
3661 tgggatgacc tggtgtccca ttataaataa agggtggtat ggctagaagg gtatgagcag
3721 taggcttatg tacacctctt atagaggttg ataggactgc ttgggtcctc cactgtcctc
3781 tgtcaatcta gttagacgtg cttctgaatg actgtagaat tggaactaga aactacacct
3841 gggctttgga gtcagatttt agttaacaat aatgagcctg ggagcagtag tactaaggcg
3901 tcttttgtag gcttaagaat ttatcctaat ggcctttata ggaccaatgc tgattttttt
3961 taaaggcagt tcctattatg tggtgaaatt ttgtaaataa atgattatac aaaacagtca
4021 ccacctagaa ctgggtattc tttgtacatt gtcagatatc tttcaaagta taaattagga
4081 ataaaaatgt tccacatgat atgtgtacaa attcttttta agattgtcat cttgtacagc
4141 aaaatattat gttggtatat tacttcctta ttaatttgca aatgattgga ttaaaaaagc
4201 tcactgtatt ccttactaac ctgttgtgtg aaacataaca ttggcagtcg aggagtcaga
4261 actcggattc ccagcctcac tccctctgtg tgtgttgacc acgtctctgc tgtgaatagg
4321 atttcatgca gtggtctgtt atggggcttt gcagcgtggg gggctgcaga agattctcag
4381 acattcttat ccttctggag tctcaaccca tcaggttcag accagtagga accaggctgg
4441 gtcaggctct taatttcact acggtggggg acaaaatgaa cactggcttt tgttcacttt
4501 gcccctgaga gatctagtcc tgtcctgtga tggcttccac aaaccctgtt ggaagtttgg
4561 gttattccta taactgtatg tgttgagtgg ccgtgaggct atggacctag cctggaattt
4621 agatgtctag ctatttttta atcttgttgg taaatgctca gaggtctgtg ctacctctgt
4681 gaggtatata ctaaaatgaa tgtaaaataa ggatcgtatt ccctgcttta aggaactggt
4741 agtcttgttt gggtgatgag acaaagttct tgagacattt aaactgtatt taccagtgtg
4801 aaaaatgtca tttatggaga ttaattcatt atggaaataa aacattgcct aagcccttga
4861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//