LOCUS BC051695 3678 bp mRNA linear HUM 23-AUG-2007
DEFINITION Homo sapiens FERM domain containing 8, mRNA (cDNA clone MGC:50982
IMAGE:5298820), complete cds.
ACCESSION BC051695
VERSION BC051695.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3678)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3678)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982912.
FEATURES Location/Qualifiers
source 1..3678
/db_xref="H-InvDB:HIT000053654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50982 IMAGE:5298820"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3678
/gene="FRMD8"
/gene_synonym="FKSG44"
/db_xref="GeneID:83786"
/db_xref="HGNC:HGNC:25462"
CDS 106..1500
/gene="FRMD8"
/gene_synonym="FKSG44"
/codon_start=1
/product="FERM domain containing 8"
/protein_id="AAH51695.1"
/db_xref="GeneID:83786"
/db_xref="HGNC:HGNC:25462"
/translation="MDGTEGSAGQPGPAERSHRSSVSSVGARAADVLVYLADDTVVPL
AVENLPSLSAHELHRAVREVLQLPDIALDVFALWLVSPLLEVQLKPKHQPYKLGRQWP
ELLLRFTSAPDDDVAMDEPFLQFRRNVFFPKRRELQIHDEEVLRLLYEEAKGNVLAAR
YPCDVEDCEALGALVCRVQLGPYQPGRPAACDLREKLNSFLPAHLCKRGQSLFAALRG
RGARAGPGEQGLLNAYRQVQEVSSDGGCEAALGTHYRAYLLKCHELPFYGCAFFHGEV
DKPAQGFLHRGGRKPVSVAISLEGVHVIDSREKHVLLGLRFQELSWDHTSPEEEEPIL
WLEFDGDSEGTPVNKLLKIYSKQAELMSSLIEYCIELSQAAEPAGPQDSATGSPSDPS
SSLAPVQRPKLRRQGSVVSSRIQHLSTIDYVEDGKGIRRVKPKRTTSFFSRQLSLGQG
SYTVVQPGDSLEQG"
BASE COUNT 624 a 1098 c 1135 g 821 t
ORIGIN
1 gtccttagcg ggagcccgag tgcgggcggt ggcgggcttg gcggcggggc aggattccag
61 gcaggagcct tgcctctcag gtggcgggct ctgcgaccct gcgagatgga cgggacagaa
121 ggcagtgccg ggcagcccgg ccccgctgag cgatcccacc gaagcagcgt gtcctccgtg
181 ggagcccgag cggctgacgt gctggtatac ctagcggatg acacggtggt gcccctggct
241 gtggagaacc tgccctcgct cagtgcccat gagctgcacc gcgctgtccg cgaggtcctg
301 cagcttccag acatcgccct ggatgtcttc gcgctctggc tggtctcccc tctgctggag
361 gtgcagctga aacccaagca ccagccctac aagctgggac gccagtggcc ggagctgctg
421 ctgcgcttca ccagtgcccc agacgatgac gtggccatgg atgagccttt cctgcagttc
481 cgaaggaacg tgttcttccc aaagcggcgg gagctccaga tccatgacga ggaggtcctg
541 cggctgctct atgaggaggc caagggcaac gtgctggctg cacggtaccc gtgcgacgtg
601 gaggactgcg aggctctggg cgccctggtg tgccgcgtgc agcttgggcc ctaccagccc
661 ggccggccgg cagcctgcga cctgagggag aagctgaact ccttcctccc tgcccacctc
721 tgtaagcggg gccagagtct ctttgctgcc ctccggggcc gtggggccag ggctgggccg
781 ggcgagcagg gcctgctgaa cgcctaccgc caggtgcagg aggtcagcag cgacggcggg
841 tgcgaggccg ccctgggcac ccactaccgc gcctatctcc tcaagtgcca cgagctgccg
901 ttttatgggt gtgccttctt ccacggtgag gttgacaagc cggcccaagg ctttttgcac
961 cggggtgggc gcaagccagt ttctgtggcc atcagtctgg aaggcgtgca cgtcatcgat
1021 agcagagaga agcatgtcct gctgggcctg cgcttccagg agctgtcgtg ggaccacacc
1081 tcccccgagg aggaggagcc catcttgtgg ctggagttcg acggggacag cgagggcaca
1141 cctgtcaaca agctcctcaa gatctactcc aagcaggccg aactgatgag cagtctcatt
1201 gagtactgca tcgaactgag ccaggcggcg gagcccgcag gcccccagga cagtgcgact
1261 ggctcgccct cggaccccag ctcctcactg gctcctgttc agcgccccaa gctgcggagg
1321 cagggcagtg tggtgtccag ccggatccag catctctcca ccatcgacta cgtggaggac
1381 ggcaagggga tcaggcgagt gaagccgaag cgcaccacat ccttcttcag ccggcagctg
1441 tccttgggcc aggggagcta caccgtggtg cagcccggcg acagcctgga gcagggctga
1501 ggacgctgca cccggcagga ggagggcgac tgggggccct ggcccggcac tgtcctcctg
1561 aggggcaggc gccggctgca acagtctcat gggtcaccac gtggggaggg ctgcctcagc
1621 aggtttctca gaccacggag aagtgacttt tgggcccggg gccatgcccg ggctgtgcaa
1681 agctggccag ggcctcctgt agggctcctc tgcagcctgc cctgccttcc cccggatgct
1741 gggccctgct gctctctcag gaccatccga tcaagctgca gctgccaccc tcacctagaa
1801 acatgccttt gtgcccacct caagatgggc agtgtccctg ttctgaagtg cccagtggca
1861 gctccagtgg tagaggacca aggattgagg tttgggacct gaagctccag tgtgtgcctt
1921 tggcctcttc cctggacttg ggtgaccagt ctccgtcttc ctcctgctag tgctccaccc
1981 cccggacttg gatgaccagt ttcccacctt cctcctgctg gtgctccatc ccccaatacc
2041 aggctgggcc accactctga ggagggtagg aggggcctcc ctggattgaa ccgggacaga
2101 aacatggtga gggcccccac cacacctccc tggttgaatc aggaatggag ggagccaggc
2161 agggccctac ctggggtcct gtgcccctcg ttctggtctc ctttgcaggc acgagatacc
2221 agaaagagca tgcctttctg atagcctttg gtgatgtcac tgctgggagg tggctatcct
2281 gtggaccacc tggcctccag acccacactc acagtctgtg aaaaactgaa aatcccctgg
2341 tgggcactcc ctggagccca agcagctccc ctaggggact gaccggacct gacctcccct
2401 ccctgtgtct gggtcttcag gttttagttt ggtctttgtt catctgagtt gtgctggggc
2461 aacgccagga agtgccctgg gtaacctctg ctgtgcgctc cttcccaggt ggcgccatgg
2521 attcctctgg gggctggcgc atgcccagga aagcctgggc cacacgggac actctcttct
2581 ttatcgagga cacttggaaa ggtgactgat atgggtgctt ggcttctctg gtcccagctt
2641 gccctccggg gagcaggggc tctgtcttgt cccagatgag ctgagagccc ctgagaggag
2701 ggctttccca gccctgggac cctccgaggt gggtgtgcgg gtctcacagg tgcttcctgg
2761 gacttcctgt ggctgcacag ggcttggctt tgtcttcgtt cccggtggaa aaccgtggga
2821 gaggaagctt gggcctctac tccaagtatc agagcctgtt caccctcctc cctttggtag
2881 cttgtgaatg tgccaggtgt ttcgaggtag gcttgccttc tggcagcatg gactttgtta
2941 aaataatagg cggaaagaag aggcctggga agggccccca gtcttttgga atgtcctggt
3001 cacagggtca tgtcagctgc cagttctcgt ctcccgtcct ggagttgctc ggtcttgcgg
3061 agctgcccgc ctgcctgttc tggcggctcc agcgcaggct gtccctgctg ctttgattcc
3121 aggtgatttt atttttttta tttttttatt ttttttgaga cggagtcttg ctctgttgcc
3181 caggcaggag tgcagtggcg catctcggct cactgcaacc tctgtctcaa gcgattctcc
3241 tgcctcagcc tcctgagtag ctgggattac aggtgcatgc caccaggccc cgctgatttt
3301 tgtattttta gtagagatag ggtttcacca tgttggtcag gctggtcgtg aactcctgac
3361 ctcatgatct gcccgcctca acctcccaaa gtgctgggat tataggcgtg agccaccgcc
3421 cccagctgat ttcaggcgaa ttcttctctg atgggcgggc gagggtgtgt tcgtgtgatg
3481 ggttggagtg tgtgtgtctg agtacacaga tgatgtgttt tcccttcagc ttcttacgtt
3541 ttctgagcat ccgttgtgcc ttaacatttt ctgcttgtcc ttttggacaa agcagtattt
3601 tactcattct ttgaatgttc tcattctttt gtatcatgtg acttattaaa atcagtttct
3661 aacaaaaaaa aaaaaaaa
//