LOCUS BC051688 3668 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens PNMA-like 1, mRNA (cDNA clone MGC:51034
IMAGE:5295669), complete cds.
ACCESSION BC051688
VERSION BC051688.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39780596.
FEATURES Location/Qualifiers
source 1..3668
/db_xref="H-InvDB:HIT000053651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51034 IMAGE:5295669"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3668
/gene="PNMAL1"
/db_xref="GeneID:55228"
/db_xref="HGNC:HGNC:25578"
CDS 264..1583
/gene="PNMAL1"
/codon_start=1
/product="PNMA-like 1"
/protein_id="AAH51688.2"
/db_xref="GeneID:55228"
/db_xref="HGNC:HGNC:25578"
/translation="MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLN
GVLSPLGPYRVLNKIFVREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQ
DAEFLKNLNEFLDAEGRTWEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQI
IFCMDAEIRSREEARAQEAAEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNW
NATEDQHEPTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEV
GDAESMAISEPIKGSRKPCVNKEELALKKPMAKCAWKGPREPPQDARAEAESPGGASE
SDQDGGHESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKG
PGSRREASDQKAPRGQQPAEATASTSRGPKAKPEGSPRRATNESRKV"
BASE COUNT 939 a 860 c 1007 g 862 t
ORIGIN
1 gctaacggca tcgagtctgg acgccccgtg acccgcctgg gccggagcga gggcggacgg
61 cgccttcttg gccctttctg cctctagcag cggcgccggg gtagccggag ccagcgactg
121 ggaaacggct gcattccact gcgtctcctt ggcctggctg ggcggtcgga ggctggtctg
181 ccaagattac tgtttggaga ccgctgcagc ccacgtccac ctgatagact atttactaca
241 catagtagat tcagagccgc taaatgtcca agaccatggc gatgaacctt ctggaggatt
301 ggtgcagggg aatggaagtg gacatccaca ggtccttgtt ggtcacaggc atcccagagg
361 actgtgggca ggcagaaatt gaggagacct tgaatggggt cctctcccca ctgggcccgt
421 accgcgtgct caacaagatt tttgtgaggg aagagaatgt taaagctgcc ctcattgagg
481 ttggtgaagg tgtgaatctg agcaccatcc cccgtgaatt cccaggaagg ggtggtgtct
541 ggagagtggt ctgtagagac cctacccagg atgccgagtt tttaaaaaat ctgaatgaat
601 tcctggatgc cgaggggcgc acctgggagg atgtggtccg cctgctccag ctcaaccacc
661 ccaccctgtc ccagaaccag catcagcccc cagagaactg ggcagaagct ctgggggtgc
721 ttctgggagc agtggtgcag atcatcttct gcatggatgc cgagatccgc agccgggagg
781 aagccagggc ccaggaggcc gctgaattcg aggagatggc agcctgggct ttagcagcag
841 ggaggaaggt gaagaaagaa ccggggcttg cagcagaggt gggttctgcc ttaaaggcag
901 agacccccaa caactggaat gccacggaag accagcatga gcctaccaaa cctttggttc
961 gcagggctgg agctaagtct cgctccagga gaaagaagca gaagaagaac tccaggcagg
1021 aagcagtgcc ctggaaaaaa cccaaaggca tcaattccaa cagcacagct aacttggagg
1081 atcctgaggt gggtgatgct gaaagcatgg cgatctcaga gccgatcaag ggcagcagaa
1141 agccctgtgt gaataaggag gagttggctt tgaagaagcc catggcgaaa tgtgcctgga
1201 agggtcccag agagccacct caggatgccc gggcagaagc cgagagccca ggaggcgcct
1261 ctgagtcaga ccaagatggt ggccatgaaa gcccaccaaa gaagaaggcc gtggcctggg
1321 tgtctgccaa gaaccccgct cccatgagga agaagaagaa ggtgagcttg ggccctgtct
1381 cctacgtctt ggttgactca gaagatggca ggaagaagcc ggtgatgcca aagaaagggc
1441 caggctcaag aagggaggca tcagatcaga aggcccctcg gggccagcag cctgccgagg
1501 caacagcctc aacctctagg ggtccgaagg ccaagccaga aggctctcct cggcgtgcca
1561 ccaatgaatc cagaaaggtt tgatctgggg gaccacccat actgaggagt tgaaagaaca
1621 aggaagacgt accaagtcaa ccaagttctc tcttgtcact gaataagact ttggactctc
1681 ttagggcccc tgttgataga gatctggccc tgaggtaaac gataggtgag gtcttgggtg
1741 ggagggagtt ggggaaggga ggtggatctc tatgcccttt tctctaccag gcctgccgtt
1801 tcaccgcctt ctctactcac cttctcttcg gaggcaggag agttggtaag aggattggga
1861 aaattctaga acattcattc ccctttatgc atgagcaggg tcactgttac actcatccat
1921 gttcagcttt tctcccccac gccttgctcc ctcctcggaa tggtcagcga cctctgcagg
1981 ccctggcatt tggaagagct gggtggccct gccatattct tcctcccgcc ttcctcttgt
2041 gtaaccagcg gggtaagtta agccaggacc ttcgctgcaa acctggtttt attgctcctt
2101 cagtctccag cttccatcct ccagttatct agccaggagg tcccaagagt tagttttagg
2161 gaaaaagaat gtctgcctag acctcaaagt ctttgagttt tagagtctgt tagtaaaaat
2221 ggcactttga ttcccatttg ggatgagccc tctcaggaat cctgtgggga aggggggtga
2281 ttatagggaa ggacgcaggc attcctaggt ccccagctct aattccatcc atctacccaa
2341 ctgtcaccat ctttgcacca aactgtcacc atctttgcag cagaaggtca ctactcacat
2401 tatagtaaga ggggaaaaaa atcttttaaa acttggctgt tggccgggca cggtggctca
2461 cgcctgtaat cccagcactt tgggaggctg aggcaggtcg atcacgaggt caggcgttta
2521 agacaagctt gaccaacatg gtgaaacccc atctctacaa aaattagctg ggcgtggtgg
2581 cgcgcgcctg taatcccagc tactcaggag gctgaggcag atgaattgct tgaatccagg
2641 aggcagaggt tgcaatgagc caagattgtg ccacggcact ccagcctggg cagcagagtg
2701 agactctctc tcaaaaaaac aaaacttggc tgttaatgtc tgccctctga attcagacac
2761 actatattag accagaccac catgtgtcat tgtgtgtgtg tgtgtgtgtg tgtgtgtttg
2821 cgtgcgcatg tgtagaggag agagcagggt ccctgagata atggtttcca aactgtatcg
2881 tagccgtcca caaagatgta atccaaatct atttttctca cgtgtttaaa aaactgaaaa
2941 gtgactactc agatatgttg gaagtcacat cgaagactat cagaatatta ccttgtgttc
3001 ataggttaac ttgtttttgt acacgtctta gttatttcag gcatctcttt gcttaaaatt
3061 gagtttcttg taaatgtgac tgatgagcga ggttagaagt ggaagaaatt cctgtgcatg
3121 ttctataatc tgacaccctg aaagcaagtt tcctttcgtc attcacatgc tcttgttctg
3181 ccgtgactgt tcaggtgtat ggtagtaagt aaatgtatta acatggtgaa cagtagtaat
3241 attctatcat agagtattag cccttgcaag ttttcagggc gtcttttccg acttcagttt
3301 ttgtgataaa gaatgtgaac agttgttaga tgttctcagt gattcaactt taaaacaaat
3361 ttctcgtgat gattcatttc aaaatcctga gtgagtctga ctgaaaaata cgagagaaaa
3421 gagagtggtt tccgtttgca gctacacagc tgtgtgcatc gacgttctcc tggggtgtgt
3481 gccaagcgaa acccaggggt gaattggatt cttgaagaga ccaaagcctg taactgtcca
3541 gcttctaatt tcaaaacggg tccattaggg cttcgttgtg ttaacaagtt gacaccatga
3601 ctagtaaatg taaacgtgta tgtataaaat aaagtttagc aaattaagtg tcaaaaaaaa
3661 aaaaaaaa
//