LOCUS BC051670 3319 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens nuclear receptor subfamily 2, group C, member 2, mRNA
(cDNA clone MGC:48324 IMAGE:5272493), complete cds.
ACCESSION BC051670
VERSION BC051670.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3319)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3319)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36950990.
FEATURES Location/Qualifiers
source 1..3319
/db_xref="H-InvDB:HIT000259193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48324 IMAGE:5272493"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3319
/gene="NR2C2"
/gene_synonym="hTAK1"
/gene_synonym="TAK1"
/gene_synonym="TR2R1"
/db_xref="GeneID:7182"
/db_xref="MIM:601426"
CDS 136..1728
/gene="NR2C2"
/gene_synonym="hTAK1"
/gene_synonym="TAK1"
/gene_synonym="TR2R1"
/codon_start=1
/product="NR2C2 protein"
/protein_id="AAH51670.1"
/db_xref="GeneID:7182"
/db_xref="MIM:601426"
/translation="MTSPSPRIQIISTDSAVASPQRIQGSEPASGPLSVFTSLNKEKI
VTDQQTGQKIQIVTAVDASGSPKQQFTLTSPDGAGTGKVILASPETSSAKQLIFTTSD
NLVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFF
KRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSKRKPFDVQRE
KPSNCAASTEKIYIRKDLRSPLIATPTFVADKDGARQTGLLDPGMLVNIQQPLIREDG
TVLLATDSKAETSQGALGTLANVVTSLANLSESLNNGDTSEIQPEDQSASEITRAFDT
LAKALNTTDSSSSPSLADGIDTSGGGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTM
PSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGL
AQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG
YEYAYLKAIVLFSPGKICGGDA"
BASE COUNT 952 a 806 c 749 g 812 t
ORIGIN
1 ggagaggccg gcgcctggtc ttgggtcagc aggtgggctg cttccctccg cctggaacgc
61 gtctcgaatg agtactgagg aacaatagta ataaaggtaa cacgtacaca gacctctcgg
121 ccggaatctc cagggatgac cagcccctcc ccacgcatcc agataatctc caccgactct
181 gctgtagcct cacctcagcg cattcagggc tctgaacctg cctctggccc attgagtgtt
241 ttcacatctt tgaacaaaga gaagattgtc acagaccagc agacaggaca gaaaatccag
301 atagtcaccg cagtggacgc ctccggatcc cccaaacagc agttcaccct gaccagccca
361 gatggagctg gaactgggaa ggtgatcctg gcttccccag agacatccag cgccaagcaa
421 ctcatattca ccacctcaga caacctcgtc cctggcagga tccagattgt cacggattct
481 gcctctgtgg agcgtttact ggggaagacg gacgtccagc ggccccaggt ggtagagtac
541 tgtgtggtct gtggcgacaa agcctccggc cgtcactatg gggctgtcag ttgtgaaggt
601 tgcaaaggtt tcttcaaaag gagtgtgagg aaaaatttga cctacagctg ccggagcaac
661 caagactgca tcatcaataa acatcaccgg aaccgctgtc agttttgccg gctgaaaaaa
721 tgcttagaga tgggcatgaa aatggaatct gtgcagagta aacggaagcc cttcgatgtg
781 caacgggaga aaccaagcaa ttgtgctgct tcaactgaga aaatctatat ccggaaagac
841 ctgagaagtc ccctgatagc tactcccacg tttgtggcag acaaagatgg agcaagacaa
901 acaggtcttc ttgatccagg gatgcttgtg aacatccagc agcctttgat acgtgaggat
961 ggtacagttc tcctggccac ggattctaag gctgaaacaa gccagggagc tctgggcaca
1021 ctggcaaatg tagtgacctc ccttgccaac ctaagtgaat ctttgaacaa cggtgacact
1081 tcagaaatcc agccagagga ccagtctgca agtgagataa ctcgggcatt tgatacctta
1141 gctaaagcac ttaataccac agacagctcc tcttctccaa gcttggcaga tgggatagac
1201 accagtggag gagggagcat ccacgtcatc agcagagacc agtcgacacc catcattgag
1261 gttgaaggcc ccctcctttc agacacacac gtcacattta agctaacaat gcccagtcca
1321 atgccagagt acctcaacgt gcactacatc tgtgagtctg catcccgtct gcttttcctc
1381 tcaatgcact gggctcggtc aatcccagcc tttcaggcac ttgggcagga ctgcaacacc
1441 agccttgtgc gggcctgctg gaatgagctc ttcaccctcg gcctggccca gtgtgcccag
1501 gtcatgagtc tctccaccat cctggctgcc attgtcaacc acctgcagaa cagcatccag
1561 gaagataaac tttctggtga ccggataaag caagtcatgg agcacatctg gaagctgcag
1621 gagttctgta acagcatggc gaagctggat atagatggct atgagtatgc ataccttaaa
1681 gctatagttc tctttagccc cggtaagata tgcggtgggg atgcatgacc cctttccacc
1741 tgtatctact gatgtttctg aacgtgaaca tgttgtcatc attggtgtag aaagagccct
1801 gcagattgta tgtgacctag tgttcttatg ataggtgttt tgctagataa atacataaac
1861 gcttttaaat tcttgccttt acagccccaa agaaatatgc tgcagtgcct gatgatgtca
1921 cgcactgaat agatttaatc tgtgtcctaa ttaaaccatt ggccaaacaa gactacacca
1981 tacaaaagtg tgctgccacc cgatgtcctt tctttttttt ccggcccttt gccagtttcc
2041 aagttttgtt agcgcatata atccagtaca cattgaagtt ccacttgttt gcccacagac
2101 tgtgtatagc actgcagagc atgctaaaag gtatgttcgc aggagatgaa gaggcagcaa
2161 tcacgatgcc tgggctggcc tcactcccct tattaactgt tctctcaagt cctctggaaa
2221 agtcacttag gctaattgtt cacctcacag taaggggttg gacacagctt aacctttttg
2281 tcttccttcc cagcccttca ctcacaaaca acaaaatagc taataaaatt gggacaaatt
2341 atataattat ttagaaagta aatgacaatt tgtaatttta tgtgatagtt tttaaaacta
2401 tgtgttttct agggtagtag gaagccagat gtccagaacc aatcatgtgg ggctgttcag
2461 actgggatcc actcagggtc cccgacccgc tcccaggaac ttcaggcctg ggcagaaaac
2521 agaggaaaag ccagtgttct aataataccc aaactagatc agtctttgag ttcaatttgt
2581 tgtacttaag aagtttgcag aagtttgact aaaagtacta agaagtctac aagtgagact
2641 tttcaaatac agagggaact gggggggggt acttttctgt tttcagatca tccaggtttg
2701 accagcacaa gccagattga aaaattccaa gaaaaggcac agatggagtt gcaggactat
2761 gttcagaaaa cctactcaga agacacctac cgattggccc ggatcctcgt tcgcctgccg
2821 gcactcaggc tgatgagctc caacataaca gaagaacttt tttttactgg tctcattggc
2881 aatgtttcga tagacagcat aatcccctac atcctcaaga tggagacagc agagtataat
2941 ggccagatca ccggagccag tctatagcgc aaaccacaca cctgccaagg agcaacagaa
3001 tccttccagg accgttcaca tacaaagaaa agtagtggta ttttggtatg tgcaaatatt
3061 tccatatgtt agccatttcc tgtctggttt ctccttatct gttaatccca gacaatagca
3121 attaaaagac tagtaggatc ctttcctgac ataagaaatg ttttaatgcc ttttgatgaa
3181 gcagcagatt ttggaacaat cttttaactc aatttgtatt tagaaattct caaagggcaa
3241 aaaaacaaaa aaaaaggttt tataatgtca gagactagta ttaaagaaaa ctgaaagaac
3301 ccgaaaaaaa aaaaaaaaa
//