LOCUS       BC051651                5396 bp    mRNA    linear   SYN 02-SEP-2016
DEFINITION  Synthetic construct Homo sapiens protein tyrosine phosphatase,
            receptor type, M, mRNA (cDNA clone MGC:51345 IMAGE:5274244),
            complete cds.
ACCESSION   BC051651
VERSION     BC051651.1
KEYWORDS    MGC.
SOURCE      synthetic construct
  ORGANISM  synthetic construct
            other sequences; artificial sequences.
REFERENCE   1  (bases 1 to 5396)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 5396)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-APR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 91 Row: e Column: 16.
FEATURES             Location/Qualifiers
     source          1..5396
                     /db_xref="H-InvDB:HIT000053648"
                     /organism="synthetic construct"
                     /mol_type="mRNA"
                     /isolation_source="Homo sapiens; Brain, hippocampus"
                     /db_xref="taxon:32630"
                     /clone="MGC:51345 IMAGE:5274244"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..5396
                     /gene="PTPRM"
                     /gene_synonym="hR-PTPu"
                     /gene_synonym="R-PTP-MU"
                     /gene_synonym="RPTPM"
                     /gene_synonym="RPTPU"
                     /db_xref="GeneID:5797"
                     /db_xref="MIM:176888"
     CDS             426..4598
                     /gene="PTPRM"
                     /gene_synonym="hR-PTPu"
                     /gene_synonym="R-PTP-MU"
                     /gene_synonym="RPTPM"
                     /gene_synonym="RPTPU"
                     /codon_start=1
                     /transl_table=11
                     /product="PTPRM protein"
                     /protein_id="AAH51651.1"
                     /db_xref="GeneID:5797"
                     /db_xref="MIM:176888"
                     /translation="MPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSK
                     SNSPPGLLNVYVKVNNGPLGNPIWNISGDPARTWNRAELAISTFWPNFYQVIFEVITS
                     GHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQG
                     IDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKE
                     PPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSY
                     KIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQI
                     TISWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTN
                     VSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGV
                     ITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKG
                     FGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEE
                     RPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNG
                     YWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVPEPEKQTDHTVKIA
                     GVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNC
                     DEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDETHTMASDTSSLVQSHT
                     YKKREPADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSA
                     KKGENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQ
                     ETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAE
                     YVIRTFAVEKRGVHEIREIRQFHFTGWPDRGVPYHATGLLGFVRQVKSKSPPSAGPLV
                     VHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDA
                     ILEACLCGDTSVPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIA
                     LLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPN
                     TVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDII
                     SRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGE
                     GRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKF
                     CYEVALEYLNSG"
BASE COUNT         1556 a         1267 c         1280 g         1293 t
ORIGIN      
        1 gtgctgtggc ccaatcctgt gcgtgtctcc tcttcaggct cctgccggag catgcttctc
       61 taatcttacc atttatcact gacccttcgg tgaaactctc ttctgtttaa atttaccagg
      121 gtacactttg taatacttgg gaccaagaat ttgaagatag taatcagaca aatcaaacaa
      181 ctagtagtag tggagagaca cgtagcccta caggaagggg tagaattatc attaaaaaca
      241 cagacaaacc agagactgcc tgaaaaaaaa aaaaagatga actggaaaga ttcaaagtag
      301 gctctattgg aggtggctgc ctctttgatg agccgtatag cacatgtgga tatagtcaat
      361 ctgaaggtga tgacttcaat tgggagcaag tgaacacctt gactaaaccg acttctgatc
      421 catggatgcc atcaggttct ttcatgctgg tgaatgcctc tgggagacct gaggggcaga
      481 gagcccacct gctcttaccc caacttaaag aaaatgacac ccactgcatc gattttcact
      541 attttgtgtc cagcaagagt aattctcctc cggggttact caatgtctac gtgaaggtca
      601 ataacgggcc actggggaat cctatctgga atatatctgg agacccagca cgtacatgga
      661 acagggcaga actggccatt agtactttct ggcctaactt ttatcaggtg atttttgaag
      721 tgataacttc tggacatcaa ggctatctcg ctatcgatga ggtgaaggtg ttaggacatc
      781 catgtaccag gactcctcac ttcctgcgga ttcagaatgt ggaagttaat gctggccagt
      841 ttgctacctt ccagtgcagt gccatcggca ggaccgtggc aggagacagg ctctggttac
      901 agggcattga tgtgcgagat gctcctctga aggaaatcaa ggtgaccagc tcccgacgct
      961 tcattgcttc atttaatgtt gtgaatacca ccaaacgaga tgctggaaag taccgctgca
     1021 tgattcgcac tgaaggaggt gttggaatat caaactatgc agagttggta gttaaagaac
     1081 cacccgttcc tattgcccca cctcagctcg cctctgtagg agccacctac ctgtggatac
     1141 agctcaacgc caactccatc aatggggatg ggcccattgt ggcccgagag gtggagtact
     1201 gcacggccag tgggagctgg aatgaccggc agccagtcga ttccacgagc tataaaattg
     1261 gacaccttga cccagataca gaatatgaga ttagtgtgct cctgaccagg ccaggggagg
     1321 gtggcactgg ctctcctggt ccagctctca ggacaagaac aaagtgtgct gatcccatgc
     1381 gaggcccaag aaaactagaa gtagtggagg tcaaatctcg gcaaatcact atcagctggg
     1441 agccatttgg atataatgta actcgttgcc acagttataa tctcactgtc cactactgtt
     1501 accaagttgg aggacaagaa caagtgcgag aagaagtaag ctgggataca gaaaactcac
     1561 accctcaaca cacgatcact aacctgtcac catacaccaa tgtcagtgtg aaactgatcc
     1621 tcatgaaccc agagggccgg aaggaaagcc aagaactcat agtgcagaca gatgaagacc
     1681 tcccaggtgc tgttcccact gaatccatac aaggaagtac ctttgaagag aagatatttc
     1741 ttcagtggag agaaccaact caaacatatg gtgtaatcac tttatatgag atcacctaca
     1801 aagcagtcag ttcctttgac ccagaaatag atttatccaa tcagagtgga agagtttcaa
     1861 agctgggaaa tgaaacccat ttcctgtttt ttggactgta tccggggacc acatactcct
     1921 ttaccatccg agctagcaca gctaagggtt ttgggcctcc agcaacaaac cagttcacca
     1981 ccaaaatatc agcaccctct atgccagctt atgaacttga gacacctttg aatcaaactg
     2041 acaataccgt gacagtcatg ctgaaacctg cccacagcag aggagcacct gtcagtgtct
     2101 atcaaatagt tgttgaggaa gaacgtcctc gaagaactaa aaagacgaca gaaatcttaa
     2161 agtgctaccc agtgccaatt cacttccaga atgcttctct gctgaactca cagtactact
     2221 ttgctgcaga atttcctgca gacagcctcc aagctgcgca gccttttaca attggtgata
     2281 ataagacata taatggatac tggaacactc cccttctccc ctataaaagc tacagaattt
     2341 atttccaagc tgctagtaga gccaatgggg aaaccaaaat agactgtgtc caagtggcca
     2401 caaaaggagc tgccactccg aaaccagtcc cagaacccga gaaacagaca gaccatacag
     2461 ttaaaattgc tggagtcatc gcgggcatct tgctgttcgt gattatattt cttggagttg
     2521 tgttggtaat gaagaaaagg aaactggcca agaagcggaa agagaccatg agcagcaccc
     2581 gacaggagat gactgtgatg gtgaactcaa tggacaagag ctatgctgag cagggcacaa
     2641 actgcgacga ggctttctca ttcatggaca cgcacaatct gaatgggaga tctgtgtctt
     2701 caccatcgtc cttcacaatg aaaacaaata cactgagcac atcggtgcct aattcctatt
     2761 acccagatga aacccacaca atggccagcg ataccagcag cctggtgcag tcccatactt
     2821 acaagaagcg agagccggcc gacgtgccct atcagactgg gcagctccac cccgccatcc
     2881 gggtggcaga cctccttcag cacatcacac agatgaagtg tgcggagggc tacggcttca
     2941 aggaggaata cgagagcttc tttgaagggc agtctgcacc atgggactcg gctaagaaag
     3001 gtgagaacag aatgaagaac agatacggga atatcattgc atacgatcat tcccgagtga
     3061 ggctgcagac aatagaagga gacacaaact cagactatat caatggcaat tatatcgatg
     3121 gttatcatcg acccaatcat tacattgcta cccaagggcc aatgcaggaa accatctatg
     3181 acttctggag gatggtgtgg cacgaaaaca ctgcaagtat catcatggtg accaatcttg
     3241 tggaagtggg aagggtcaaa tgctgcaaat actggccaga tgacacagag atatataaag
     3301 acattaaagt taccctaata gaaacagaac tactggcaga atatgtgata agaacatttg
     3361 ctgttgaaaa gagaggtgtg catgaaatcc gagagatcag acagtttcac ttcactggct
     3421 ggccggatcg tggggtcccc taccatgcca ccggcctgct gggattcgtg cggcaagtca
     3481 agtccaagag cccgcccagt gcaggcccac tggtggtgca ctgcagtgct ggtgcaggga
     3541 ggactggctg tttcatcgtc attgatatca tgttggacat ggccgaaagg gaaggggtcg
     3601 tagacatcta caactgcgtc agggagctgc ggtcacggag ggtgaacatg gtgcaaacag
     3661 aggagcagta tgtgtttatc cacgatgcga tcctggaagc ctgtctttgt ggggacacct
     3721 ctgtgcctgc ttcccaagtt aggtctctgt attatgacat gaacaaactg gatccacaga
     3781 caaactcaag ccagattaaa gaggaattcc ggacgctaaa catggtgaca ccaacgctgc
     3841 gagtagagga ctgcagcatc gcactgttgc cccggaacca tgagaaaaac cggtgcatgg
     3901 acatcctgcc cccagaccgc tgcctgccct tcctcatcac catcgatggg gagagcagca
     3961 actacatcaa tgctgccctc atggacagct ataaacagcc ttcagctttt atagtcaccc
     4021 agcatccttt gccaaacaca gtgaaagact tttggagact ggtcctggat tatcactgca
     4081 catccgtagt tatgctaaat gatgtggatc ctgcccagtt gtgtccacag tactggccag
     4141 aaaacggagt acacagacac ggccccatcc aggtggaatt tgtctctgct gacctggaag
     4201 aggacatcat cagcaggata ttccgcattt acaatgccgc cagaccccaa gatggatatc
     4261 ggatggtgca gcaattccag ttcctgggct ggccgatgta cagggacaca ccagtgtcta
     4321 agcgctcctt cttgaagctc attcgccagg tggacaagtg gcaagaggaa tacaatggcg
     4381 gggaaggccg caccgttgtg cactgcttga acgggggagg ccgcagtggg acgttctgcg
     4441 ccatcagcat cgtatgtgag atgctccggc accagagaac cgtggatgtc tttcacgctg
     4501 tgaagacact gaggaacaac aagcccaaca tggtcgacct cctggatcag tacaagttct
     4561 gctacgaggt ggccctggaa tacttgaatt ctggctgatg gtgtaaacag ctctgcaaac
     4621 aatccctttc ataccacaaa gccaagacgt tccatggtat ttgtgcaaaa gagatgaaga
     4681 cttctcaata tgcttatttt gctttgcata attggctctt tttaagagcc caagaaagtg
     4741 tttctaaaat tgcttgcact gcccaatccc agtaatgctg ctgcctgaca gaaacacaca
     4801 cacagccaca gttgccaaat cccgtactcc ttgccaccag cttcctagag cagcgtagac
     4861 agctggtaaa ctgaagagca caactatatt cttatgaagg aatttgtacc tttggggtat
     4921 tattttgtgg cccgtgaccc tcgttattgt tacagctgag tgtatgtttt tgttctgtgg
     4981 agaatgctat ctggcattat ggtaatatat tattttaggt aatatttgta ctttaacatg
     5041 ttgcataata tatgcttatg tagctttcca ggactaacag ataaatgtgt aatgaacaaa
     5101 gatatgttgt atgagtcgtc gtttctgtca gatttgtatt gtttccaagg gaaaagcttg
     5161 ggggaggact cagttcacaa aatgcaaaac tcaacgatca gattcacgga cccagagctt
     5221 ttccatgtgt ttatattgta aatatttttg atttcatcaa attatttatt cattaaaaga
     5281 aatttttgcg aaaaaaaaaa aaaaaactct ccagcgctgg atccggccat aagggcctga
     5341 tccagcgctg gagagttttt tttttttttt tcttgaaatg tcaattactg ctatgc
//