LOCUS BC051651 5396 bp mRNA linear SYN 02-SEP-2016 DEFINITION Synthetic construct Homo sapiens protein tyrosine phosphatase, receptor type, M, mRNA (cDNA clone MGC:51345 IMAGE:5274244), complete cds. ACCESSION BC051651 VERSION BC051651.1 KEYWORDS MGC. SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 5396) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5396) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: e Column: 16. FEATURES Location/Qualifiers source 1..5396 /db_xref="H-InvDB:HIT000053648" /organism="synthetic construct" /mol_type="mRNA" /isolation_source="Homo sapiens; Brain, hippocampus" /db_xref="taxon:32630" /clone="MGC:51345 IMAGE:5274244" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5396 /gene="PTPRM" /gene_synonym="hR-PTPu" /gene_synonym="R-PTP-MU" /gene_synonym="RPTPM" /gene_synonym="RPTPU" /db_xref="GeneID:5797" /db_xref="MIM:176888" CDS 426..4598 /gene="PTPRM" /gene_synonym="hR-PTPu" /gene_synonym="R-PTP-MU" /gene_synonym="RPTPM" /gene_synonym="RPTPU" /codon_start=1 /transl_table=11 /product="PTPRM protein" /protein_id="AAH51651.1" /db_xref="GeneID:5797" /db_xref="MIM:176888" /translation="MPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSK SNSPPGLLNVYVKVNNGPLGNPIWNISGDPARTWNRAELAISTFWPNFYQVIFEVITS GHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQG IDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKE PPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSY KIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQI TISWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTN VSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGV ITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKG FGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEE RPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNG YWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVPEPEKQTDHTVKIA GVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNC DEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDETHTMASDTSSLVQSHT YKKREPADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSA KKGENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQ ETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAE YVIRTFAVEKRGVHEIREIRQFHFTGWPDRGVPYHATGLLGFVRQVKSKSPPSAGPLV VHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDA ILEACLCGDTSVPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIA LLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPN TVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDII SRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGE GRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKF CYEVALEYLNSG" BASE COUNT 1556 a 1267 c 1280 g 1293 t ORIGIN 1 gtgctgtggc ccaatcctgt gcgtgtctcc tcttcaggct cctgccggag catgcttctc 61 taatcttacc atttatcact gacccttcgg tgaaactctc ttctgtttaa atttaccagg 121 gtacactttg taatacttgg gaccaagaat ttgaagatag taatcagaca aatcaaacaa 181 ctagtagtag tggagagaca cgtagcccta caggaagggg tagaattatc attaaaaaca 241 cagacaaacc agagactgcc tgaaaaaaaa aaaaagatga actggaaaga ttcaaagtag 301 gctctattgg aggtggctgc ctctttgatg agccgtatag cacatgtgga tatagtcaat 361 ctgaaggtga tgacttcaat tgggagcaag tgaacacctt gactaaaccg acttctgatc 421 catggatgcc atcaggttct ttcatgctgg tgaatgcctc tgggagacct gaggggcaga 481 gagcccacct gctcttaccc caacttaaag aaaatgacac ccactgcatc gattttcact 541 attttgtgtc cagcaagagt aattctcctc cggggttact caatgtctac gtgaaggtca 601 ataacgggcc actggggaat cctatctgga atatatctgg agacccagca cgtacatgga 661 acagggcaga actggccatt agtactttct ggcctaactt ttatcaggtg atttttgaag 721 tgataacttc tggacatcaa ggctatctcg ctatcgatga ggtgaaggtg ttaggacatc 781 catgtaccag gactcctcac ttcctgcgga ttcagaatgt ggaagttaat gctggccagt 841 ttgctacctt ccagtgcagt gccatcggca ggaccgtggc aggagacagg ctctggttac 901 agggcattga tgtgcgagat gctcctctga aggaaatcaa ggtgaccagc tcccgacgct 961 tcattgcttc atttaatgtt gtgaatacca ccaaacgaga tgctggaaag taccgctgca 1021 tgattcgcac tgaaggaggt gttggaatat caaactatgc agagttggta gttaaagaac 1081 cacccgttcc tattgcccca cctcagctcg cctctgtagg agccacctac ctgtggatac 1141 agctcaacgc caactccatc aatggggatg ggcccattgt ggcccgagag gtggagtact 1201 gcacggccag tgggagctgg aatgaccggc agccagtcga ttccacgagc tataaaattg 1261 gacaccttga cccagataca gaatatgaga ttagtgtgct cctgaccagg ccaggggagg 1321 gtggcactgg ctctcctggt ccagctctca ggacaagaac aaagtgtgct gatcccatgc 1381 gaggcccaag aaaactagaa gtagtggagg tcaaatctcg gcaaatcact atcagctggg 1441 agccatttgg atataatgta actcgttgcc acagttataa tctcactgtc cactactgtt 1501 accaagttgg aggacaagaa caagtgcgag aagaagtaag ctgggataca gaaaactcac 1561 accctcaaca cacgatcact aacctgtcac catacaccaa tgtcagtgtg aaactgatcc 1621 tcatgaaccc agagggccgg aaggaaagcc aagaactcat agtgcagaca gatgaagacc 1681 tcccaggtgc tgttcccact gaatccatac aaggaagtac ctttgaagag aagatatttc 1741 ttcagtggag agaaccaact caaacatatg gtgtaatcac tttatatgag atcacctaca 1801 aagcagtcag ttcctttgac ccagaaatag atttatccaa tcagagtgga agagtttcaa 1861 agctgggaaa tgaaacccat ttcctgtttt ttggactgta tccggggacc acatactcct 1921 ttaccatccg agctagcaca gctaagggtt ttgggcctcc agcaacaaac cagttcacca 1981 ccaaaatatc agcaccctct atgccagctt atgaacttga gacacctttg aatcaaactg 2041 acaataccgt gacagtcatg ctgaaacctg cccacagcag aggagcacct gtcagtgtct 2101 atcaaatagt tgttgaggaa gaacgtcctc gaagaactaa aaagacgaca gaaatcttaa 2161 agtgctaccc agtgccaatt cacttccaga atgcttctct gctgaactca cagtactact 2221 ttgctgcaga atttcctgca gacagcctcc aagctgcgca gccttttaca attggtgata 2281 ataagacata taatggatac tggaacactc cccttctccc ctataaaagc tacagaattt 2341 atttccaagc tgctagtaga gccaatgggg aaaccaaaat agactgtgtc caagtggcca 2401 caaaaggagc tgccactccg aaaccagtcc cagaacccga gaaacagaca gaccatacag 2461 ttaaaattgc tggagtcatc gcgggcatct tgctgttcgt gattatattt cttggagttg 2521 tgttggtaat gaagaaaagg aaactggcca agaagcggaa agagaccatg agcagcaccc 2581 gacaggagat gactgtgatg gtgaactcaa tggacaagag ctatgctgag cagggcacaa 2641 actgcgacga ggctttctca ttcatggaca cgcacaatct gaatgggaga tctgtgtctt 2701 caccatcgtc cttcacaatg aaaacaaata cactgagcac atcggtgcct aattcctatt 2761 acccagatga aacccacaca atggccagcg ataccagcag cctggtgcag tcccatactt 2821 acaagaagcg agagccggcc gacgtgccct atcagactgg gcagctccac cccgccatcc 2881 gggtggcaga cctccttcag cacatcacac agatgaagtg tgcggagggc tacggcttca 2941 aggaggaata cgagagcttc tttgaagggc agtctgcacc atgggactcg gctaagaaag 3001 gtgagaacag aatgaagaac agatacggga atatcattgc atacgatcat tcccgagtga 3061 ggctgcagac aatagaagga gacacaaact cagactatat caatggcaat tatatcgatg 3121 gttatcatcg acccaatcat tacattgcta cccaagggcc aatgcaggaa accatctatg 3181 acttctggag gatggtgtgg cacgaaaaca ctgcaagtat catcatggtg accaatcttg 3241 tggaagtggg aagggtcaaa tgctgcaaat actggccaga tgacacagag atatataaag 3301 acattaaagt taccctaata gaaacagaac tactggcaga atatgtgata agaacatttg 3361 ctgttgaaaa gagaggtgtg catgaaatcc gagagatcag acagtttcac ttcactggct 3421 ggccggatcg tggggtcccc taccatgcca ccggcctgct gggattcgtg cggcaagtca 3481 agtccaagag cccgcccagt gcaggcccac tggtggtgca ctgcagtgct ggtgcaggga 3541 ggactggctg tttcatcgtc attgatatca tgttggacat ggccgaaagg gaaggggtcg 3601 tagacatcta caactgcgtc agggagctgc ggtcacggag ggtgaacatg gtgcaaacag 3661 aggagcagta tgtgtttatc cacgatgcga tcctggaagc ctgtctttgt ggggacacct 3721 ctgtgcctgc ttcccaagtt aggtctctgt attatgacat gaacaaactg gatccacaga 3781 caaactcaag ccagattaaa gaggaattcc ggacgctaaa catggtgaca ccaacgctgc 3841 gagtagagga ctgcagcatc gcactgttgc cccggaacca tgagaaaaac cggtgcatgg 3901 acatcctgcc cccagaccgc tgcctgccct tcctcatcac catcgatggg gagagcagca 3961 actacatcaa tgctgccctc atggacagct ataaacagcc ttcagctttt atagtcaccc 4021 agcatccttt gccaaacaca gtgaaagact tttggagact ggtcctggat tatcactgca 4081 catccgtagt tatgctaaat gatgtggatc ctgcccagtt gtgtccacag tactggccag 4141 aaaacggagt acacagacac ggccccatcc aggtggaatt tgtctctgct gacctggaag 4201 aggacatcat cagcaggata ttccgcattt acaatgccgc cagaccccaa gatggatatc 4261 ggatggtgca gcaattccag ttcctgggct ggccgatgta cagggacaca ccagtgtcta 4321 agcgctcctt cttgaagctc attcgccagg tggacaagtg gcaagaggaa tacaatggcg 4381 gggaaggccg caccgttgtg cactgcttga acgggggagg ccgcagtggg acgttctgcg 4441 ccatcagcat cgtatgtgag atgctccggc accagagaac cgtggatgtc tttcacgctg 4501 tgaagacact gaggaacaac aagcccaaca tggtcgacct cctggatcag tacaagttct 4561 gctacgaggt ggccctggaa tacttgaatt ctggctgatg gtgtaaacag ctctgcaaac 4621 aatccctttc ataccacaaa gccaagacgt tccatggtat ttgtgcaaaa gagatgaaga 4681 cttctcaata tgcttatttt gctttgcata attggctctt tttaagagcc caagaaagtg 4741 tttctaaaat tgcttgcact gcccaatccc agtaatgctg ctgcctgaca gaaacacaca 4801 cacagccaca gttgccaaat cccgtactcc ttgccaccag cttcctagag cagcgtagac 4861 agctggtaaa ctgaagagca caactatatt cttatgaagg aatttgtacc tttggggtat 4921 tattttgtgg cccgtgaccc tcgttattgt tacagctgag tgtatgtttt tgttctgtgg 4981 agaatgctat ctggcattat ggtaatatat tattttaggt aatatttgta ctttaacatg 5041 ttgcataata tatgcttatg tagctttcca ggactaacag ataaatgtgt aatgaacaaa 5101 gatatgttgt atgagtcgtc gtttctgtca gatttgtatt gtttccaagg gaaaagcttg 5161 ggggaggact cagttcacaa aatgcaaaac tcaacgatca gattcacgga cccagagctt 5221 ttccatgtgt ttatattgta aatatttttg atttcatcaa attatttatt cattaaaaga 5281 aatttttgcg aaaaaaaaaa aaaaaactct ccagcgctgg atccggccat aagggcctga 5341 tccagcgctg gagagttttt tttttttttt tcttgaaatg tcaattactg ctatgc //