LOCUS BC051380 847 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens Josephin domain containing 2, mRNA (cDNA clone
IMAGE:6107198), partial cds.
ACCESSION BC051380
VERSION BC051380.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 847)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 847)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923878.
FEATURES Location/Qualifiers
source 1..847
/db_xref="H-InvDB:HIT000099344"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6107198"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..847
/gene="JOSD2"
/gene_synonym="SBBI54"
/db_xref="GeneID:126119"
/db_xref="HGNC:HGNC:28853"
/db_xref="IMGT/GENE-DB:28853"
/db_xref="MIM:28853"
CDS <1..627
/gene="JOSD2"
/gene_synonym="SBBI54"
/codon_start=1
/product="JOSD2 protein"
/protein_id="AAH51380.1"
/db_xref="GeneID:126119"
/db_xref="HGNC:HGNC:28853"
/db_xref="IMGT/GENE-DB:28853"
/db_xref="MIM:28853"
/translation="GDAETPGSVERRGRRGAEDGMSQAPGAQPSPPTVYHERQRLELC
AVHALNNVLQQQLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDVNVIMAALQGLGL
AAVWWDRRRPLSQLALPQVLGLILNLPSPVSLGLLSLPLRRRHWVALRQVDGVYYNLD
SKLRAPEALGDEDGVRAFLAAALAQGLCEVLLVVTKEVEEKGSWLRTD"
BASE COUNT 174 a 274 c 271 g 128 t
ORIGIN
1 ggggatgcgg aaacccctgg ctcggtggag cggagaggca ggcggggagc cgaggacggc
61 atgtcccagg ccccgggagc acagccgagc ccacccaccg tgtaccacga acggcagcgc
121 ctggagctgt gtgctgtcca cgccctcaac aacgttctgc agcagcagct ctttagccag
181 gaggctgccg atgagatctg caagaggttg gccccagact cccggctgaa ccctcatcgc
241 agcctcctgg gcaccggcaa ctatgatgtc aatgtgatca tggccgctct gcaggggctg
301 ggcctggccg ccgtgtggtg ggacaggagg aggcccctgt cccagctggc cctgccccag
361 gtactggggc tgatcctgaa cctgccctcg cccgtgtcgc tggggctgct gtcactgcca
421 ctgcgccggc ggcactgggt ggccctgcgc caggtggacg gtgtctacta caacctggac
481 tccaagctgc gggcgcccga ggccctgggg gatgaggacg gagtcagggc cttcctggcg
541 gctgcgctgg cccagggcct gtgcgaggtg ctgctggtag tgaccaagga ggtggaggag
601 aagggcagct ggctgcggac agactgacca tggctgacca tcggcgccca cagcgcagtc
661 cctgcgcatc cccctccggc tgcgcacact gcatgcctgg gaaaggccag cacttcatgg
721 accctgggga ggccccgccc cctccccaca cccctgctcc ccactgccgc tgctgcctca
781 ataaatctgc tgatttgctg ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaaaaa
//