LOCUS BC051360 4272 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB11 family interacting protein 3 (class II), mRNA
(cDNA clone MGC:59778 IMAGE:6646253), complete cds.
ACCESSION BC051360
VERSION BC051360.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4272)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4272)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 24.
FEATURES Location/Qualifiers
source 1..4272
/db_xref="H-InvDB:HIT000053639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59778 IMAGE:6646253"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4272
/gene="RAB11FIP3"
/gene_synonym="KIAA0665"
/gene_synonym="Rab11-FIP3"
/db_xref="GeneID:9727"
/db_xref="HGNC:HGNC:17224"
/db_xref="MIM:608738"
CDS 339..2609
/gene="RAB11FIP3"
/gene_synonym="KIAA0665"
/gene_synonym="Rab11-FIP3"
/codon_start=1
/product="RAB11 family interacting protein 3 (class II)"
/protein_id="AAH51360.1"
/db_xref="GeneID:9727"
/db_xref="HGNC:HGNC:17224"
/db_xref="MIM:608738"
/translation="MASAPPASPPGSEPPGPDPEPGGPDGPGAAQLAPGPAELRLGAP
VGGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLEGGPRDPGPSAPPPRSGPRGQLAS
PDAPGPGPRSEAPLPELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDV
FSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDG
DGFVRIEDFIQFATVYGAEQVKDLTKYLDPSGLGVISFEDFYQGITAIRNGDPDGQCY
GGVASAQDEEPLACPDEFDDFVTYEANEVTDSAYMGSESTYSECETFTDEDTSTLVHP
ELQPEGDADSAGGSAVPSECLDAMEEPDHGALLLLPGRPHPHGQSVITVIGGEEHFED
YGEGSEAELSPETLCNGQLGCSDPAFLTPSPTKRLSSKKVARYLHQSGALTMEALEDP
SPELMEGPEEDIADKVVFLERRVLELEKDTAATGEQHSRLRQENLQLVHRANALEEQL
KEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLK
ANIERLEEEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIED
LRKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSRARESELEQEVRRLKQDNRNLKEQNE
ELNGQIITLSIQGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDR
IIVAIMETNPSILEVK"
BASE COUNT 836 a 1365 c 1398 g 673 t
ORIGIN
1 tcctgcttca caggctccgc ggcctccggc ctcctcggcc cccgtccccc ggcctcctcg
61 gcccccgtcc cccgccatcc gccgcccgga tcctcgccgc cctccctagg ccgccccgcc
121 gccatgggcc tgcgcccgcc gcgccgccgg gccgagggca gctgaggcgc ggtgcgaaga
181 tgggcgagga cagagcaggg cccgagcgcc agccccagca gcccgggcgc cccgcgcgcg
241 cccgcccgcg ccgccgaggg gatgcccgcg cccgccgccg cgccctgagc gcctttgtct
301 gccgcccgcg ccctccgcac cactagcctc tcgggagcat ggcgtcggcc ccgccggcct
361 cgcccccggg ctcggagccg ccggggcccg acccggagcc gggcgggccg gacgggccgg
421 gggcggcgca actggctccg ggccctgcgg agctacgcct cggagcgccc gtcggcggcc
481 ccgacccgca gtccccgggc ctggatgagc ctgcgcccgg ggccgctgca gatggcgggg
541 cgcgttggag cgccgggccg gccccggggc tggagggagg cccgcgagac cccgggccgt
601 ccgccccgcc gccgcgctcc ggcccgcggg ggcagcttgc gagccccgac gccccgggcc
661 cagggccgcg ctccgaagcg ccgcttccag aactcgaccc gttgttctcc tggactgagg
721 agcccgagga gtgtggcccc gcgagctgcc cggagagcgc gcctttccgc ttgcaggggt
781 ccagcagcag ccaccgagcg cggggcgagg tcgacgtctt ctctcccttc cccgcgccca
841 cggcgggcga gctggcgctg gagcaaggtc ccgggtcccc gccgcagccc tcggacctca
901 gccagaccca cccccttccg agcgagcccg tggggagtca ggaggacggc ccccgcctcc
961 gagccgtgtt cgatgccctg gacggggatg gggacggttt cgtccgcatc gaggacttca
1021 tccagtttgc tacggtctac ggggcagagc aggtgaagga cttaactaag tacttggatc
1081 ccagtgggct cggcgtgatc agctttgaag acttctacca agggatcaca gccatcagaa
1141 acggagatcc tgatggccag tgctacggtg gtgtcgcttc tgcccaagat gaggagcccc
1201 tggcctgccc ggacgagttc gatgacttcg tcacctatga ggccaacgag gtgacggaca
1261 gcgcgtacat gggctccgag agcacctaca gtgagtgtga gaccttcacg gacgaggaca
1321 ccagcaccct ggtgcaccct gagctgcaac ctgaagggga cgcagacagt gccggcggct
1381 cggccgtgcc ctctgagtgc ctggacgcca tggaggagcc cgaccatggt gccctgctgc
1441 tgctcccagg caggcctcac ccccatggcc agtctgtcat cacggtgatc gggggcgagg
1501 agcactttga ggactacggt gaaggcagtg aggcggagct gtccccagag accctatgca
1561 acgggcagct gggctgcagt gaccccgctt tcctcacgcc cagtccgaca aagcggctct
1621 ccagcaagaa ggtggcaagg tacctgcacc agtcaggggc cctgaccatg gaggccctgg
1681 aggacccttc ccccgagctc atggagggcc cagaggagga cattgctgac aaggttgtct
1741 tcctggaaag gcgtgtgctg gagctggaaa aggacacggc agccaccggt gagcaacaca
1801 gccgcctgag gcaggagaac ctgcagctgg tgcacagagc aaacgccctg gaggagcagc
1861 tgaaggagca ggagctgaga gcctgcgaga tggtcctgga agagacccgg cgtcagaagg
1921 agctcctgtg caagatggag agggagaaga gcattgagat cgagaacctg cagaccaggc
1981 tacagcaact ggacgaggag aacagtgaac tccggtcctg cacgccctgt ctgaaggcca
2041 acattgagcg tctggaggag gagaagcaga agctgttgga tgagatagag tcgctgacgc
2101 tgcggctcag tgaagagcag gagaacaaga ggagaatggg ggacaggctg agtcacgaga
2161 ggcaccagtt ccagagggac aaggaggcca cccaggagct gatcgaggac ctccgaaagc
2221 agctggagca cctgcagctc ctcaagctgg aggccgagca gcggcggggc cgcagcagca
2281 gcatgggcct gcaggagtac cacagccgcg cccgggagag cgagctggag caggaggtcc
2341 gcaggctgaa gcaggacaac cgcaacctga aggagcagaa cgaggagctg aacgggcaga
2401 tcattaccct cagcatccag ggcgccaaga gcctcttctc cacagccttc tctgagtccc
2461 tggctgcaga gatcagctcc gtctcccgag atgagctcat ggaggcgatt cagaagcagg
2521 aggagatcaa cttccgcctg caggactaca tcgacaggat catcgtggcc atcatggaga
2581 ccaacccgtc catcctggag gtcaagtaga ggcaggaagg tccagcctga gctggattcg
2641 ggactccaac accctggagt ggttccgtca gaccatgagg agccaagacc agcaggtccc
2701 acagccgaca gtgcccagag catgcaggga accctcgtgc agctgagctg gggccgccaa
2761 agaccggggc tgccaaaggg gcagagggtg gtggagagga gagggagaaa gggaagtccc
2821 agggcccggg gtccacagag gatgagggtt gtggcagggc cgtccatcag cgctgacctt
2881 ccgggggccc agagcttccc agccctgagt caagctggcc atgaacgcgt acacttcagt
2941 tcagcaggat gggctggaga gcctctctgt gcagcggtgt ggggtgagcc ctgctgtggc
3001 ctccttgtgg tggtccctct tcccacgtgc agccctgttg ggaagaaagg aagaaaacag
3061 gtccctccag gggtgctgct gcctaagcca cccacataag tacgctggtg ccgtgtcacc
3121 catgttgagc cgctcctgat ggctgacggg ctcccagacc ctcacctcgg acatggtggt
3181 gggggaagga cgggtgggca aggctggtgc gttccccagc tctccctacg ctgctcgggc
3241 cattgcccag ccagatgtgg tcacctcagt ccagctctgg ggcctccagg ccatgtggct
3301 gttcccacgg cccagtcctc gctgcagtaa cccctggggg ctctgaccac ctatgggggc
3361 cgggcaggag cctctggggc ctccactccg acatcaggac ctgagatgac cgctgtgtgg
3421 cgctctctcc ctgggcaggg tggatgccac aggcccctct ggctcccagg tgctgcttct
3481 ccacaggtgc ggcctggccc ggcctcctaa aggccacacc ctccccacgc acttcccagg
3541 ccagaatcca aacatcggga accctgtttt cttctgggtg tgtctcactt agaaatcgtg
3601 gttcttcccc gagggtgcat gttgcaggag ggagagggca gggaagactc acagcagagc
3661 aggagggggc ctgtgcttct cggggtctgc accccaggca cagcggtgtc accccgcagg
3721 accgcgggcc tgccccaacc cccagcattc ccgggtgggc ccagacccca tcaccaagac
3781 tggccacccg ctgcgtgtgt gtgcgcgcgc gtgtacgtgt ggccccacat ccgccgcctt
3841 ccacgctagg atgtaagagg tcgcctccta ttgtacattt ggggaaagcc ttgggtgtaa
3901 atcagtgtaa acttggagga gagatttttc tatcatgtag agtaggtatt ttttatagat
3961 tgaaggttga tcaatttttt aatactttca agagaaaact gtgtatacac atgaaatata
4021 tatatatata tatatatata tatgtataat atataaagac tggcaccctg cctctctgtg
4081 cccaggccca gccctggtga catggcacca ctcagcagtg ctgtcactgt aagcatggac
4141 tcccaggaga cagtgtggga aacgctcctg ctttaattcc ccgagaaacg gctcttcctg
4201 cctggatgca ggagggcagg ggccaccaca gattaaagct gttactgcac aaaaaaaaaa
4261 aaaaaaaaaa aa
//