LOCUS BC051321 1810 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens heparanase, mRNA (cDNA clone MGC:59678 IMAGE:6250265), complete cds. ACCESSION BC051321 VERSION BC051321.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1810) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1810) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: g Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923365. FEATURES Location/Qualifiers source 1..1810 /db_xref="H-InvDB:HIT000053622" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59678 IMAGE:6250265" /tissue_type="Pancreas, ductal carcinoma" /clone_lib="NIH_MGC_110" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1810 /gene="HPSE" /gene_synonym="HPA" /gene_synonym="HPR1" /gene_synonym="HPSE1" /gene_synonym="HSE1" /db_xref="GeneID:10855" /db_xref="HGNC:HGNC:5164" /db_xref="MIM:604724" CDS 138..1769 /gene="HPSE" /gene_synonym="HPA" /gene_synonym="HPR1" /gene_synonym="HPSE1" /gene_synonym="HSE1" /codon_start=1 /product="heparanase" /protein_id="AAH51321.1" /db_xref="GeneID:10855" /db_xref="HGNC:HGNC:5164" /db_xref="MIM:604724" /translation="MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPAQAQDVVDLDFF TQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFL IFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKF KNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNI SWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTA KMLKSFLKAGGEVIDSVTWHHYYLNGRTATREDFLNPDVLDIFISSVQKVFQVVESTR PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYH LVDENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDL TLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTL PPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI" BASE COUNT 471 a 446 c 431 g 462 t ORIGIN 1 ccagcgctgc tccccgggcg ctcctccccg ggcgctcctc cccaggcctc ccgggcgctt 61 ggatcccggc catctccgca cccttcaagt gggtgtgggt gatttcctgg cggggggagc 121 agccaggtga gcccaagatg ctgctgcgct cgaagcctgc gctgccgccg ccgctgatgc 181 tgctgctcct ggggccgctg ggtcccctct cccctggcgc cctgccccga cctgcgcaag 241 cacaggacgt cgtggacctg gacttcttca cccaggagcc gctgcacctg gtgagcccct 301 cgttcctgtc cgtcaccatt gacgccaacc tggccacgga cccgcggttc ctcatcctcc 361 tgggttctcc aaagcttcgt accttggcca gaggcttgtc tcctgcgtac ctgaggtttg 421 gtggcaccaa gacagacttc ctaattttcg atcccaagaa ggaatcaacc tttgaagaga 481 gaagttactg gcaatctcaa gtcaaccagg atatttgcaa atatggatcc atccctcctg 541 atgtggagga gaagttacgg ttggaatggc cctaccagga gcaattgcta ctccgagaac 601 actaccagaa aaagttcaag aacagcacct actcaagaag ctctgtagat gtgctataca 661 cttttgcaaa ctgctcagga ctggacttga tctttggcct aaatgcgtta ttaagaacag 721 cagatttgca gtggaacagt tctaatgctc agttgctcct ggactactgc tcttccaagg 781 ggtataacat ttcttgggaa ctaggcaatg aacctaacag tttccttaag aaggctgata 841 ttttcatcaa tgggtcgcag ttaggagaag attttattca attgcataaa cttctaagaa 901 agtccacctt caaaaatgca aaactctatg gtcctgatgt tggtcagcct cgaagaaaga 961 cggctaagat gctgaagagc ttcctgaagg ctggtggaga agtgattgat tcagttacat 1021 ggcatcacta ctatttgaat ggacggactg ctaccaggga agattttcta aaccctgatg 1081 tattggacat ttttatttca tctgtgcaaa aagttttcca ggtggttgag agcaccaggc 1141 ctggcaagaa ggtctggtta ggagaaacaa gctctgcata tggaggcgga gcgcccttgc 1201 tatccgacac ctttgcagct ggctttatgt ggctggataa attgggcctg tcagcccgaa 1261 tgggaataga agtggtgatg aggcaagtat tctttggagc aggaaactac catttagtgg 1321 atgaaaactt cgatccttta cctgattatt ggctatctct tctgttcaag aaattggtgg 1381 gcaccaaggt gttaatggca agcgtgcaag gttcaaagag aaggaagctt cgagtatacc 1441 ttcattgcac aaacactgac aatccaaggt ataaagaagg agatttaact ctgtatgcca 1501 taaacctcca taatgtcacc aagtacttgc ggttacccta tcctttttct aacaagcaag 1561 tggataaata ccttctaaga cctttgggac ctcatggatt actttccaaa tctgtccaac 1621 tcaatggtct aactctaaag atggtggatg atcaaacctt gccaccttta atggaaaaac 1681 ctctccggcc aggaagttca ctgggcttgc cagctttctc atatagtttt tttgtgataa 1741 gaaatgccaa agttgctgct tgcatctgaa aataaaatat actagtcctg acaaaaaaaa 1801 aaaaaaaaaa //