LOCUS BC051307 2682 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens synapsin II, mRNA (cDNA clone MGC:59674
IMAGE:5802100), complete cds.
ACCESSION BC051307
VERSION BC051307.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: e Column: 10.
FEATURES Location/Qualifiers
source 1..2682
/db_xref="H-InvDB:HIT000053617"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59674 IMAGE:5802100"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2682
/gene="SYN2"
/gene_synonym="SYNII"
/gene_synonym="SYNIIa"
/gene_synonym="SYNIIb"
/db_xref="GeneID:6854"
/db_xref="HGNC:HGNC:11495"
/db_xref="MIM:600755"
CDS 151..1899
/gene="SYN2"
/gene_synonym="SYNII"
/gene_synonym="SYNIIa"
/gene_synonym="SYNIIb"
/codon_start=1
/product="synapsin II"
/protein_id="AAH51307.1"
/db_xref="GeneID:6854"
/db_xref="HGNC:HGNC:11495"
/db_xref="MIM:600755"
/translation="MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGA
ASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDA
PAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGT
YAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLES
IYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSG
MGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGN
WKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSM
PLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP
QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTAHG
DAPSSSSSLAEAQPPLAAPPQKPQPHPQLNKSQSLTNAFSFSESSFFRSSANEDEAKA
ETIRSLRKSFASLFSD"
BASE COUNT 592 a 856 c 682 g 552 t
ORIGIN
1 gtctgcgggg tctggcgccg gggtctgagt ctctgctggc taagccgccg cctcagccgc
61 ctcagtcgcc tcaatctcgc cttccgccct cgctctccct ccgcgccacc agaccccgta
121 gccccgcgcg cccccagccc tttaagccag atgatgaact tcctgcggcg ccggctgtcg
181 gacagcagct tcatcgccaa cctgcccaac ggctacatga ccgacctgca gcggcccgag
241 ccccagcagc cgccgccgcc gccgcccccc ggtccgggcg ccgcctcggc ctcggcggcg
301 cccccgaccg cctcgccggg cccggagcgg aggccgccgc ccgcctcggc gcccgcgccg
361 cagcccgcgc cgacgccgtc ggtgggcagc agcttcttca gctcgctgtc ccaagccgtg
421 aagcagacgg ccgcctcggc tggcctggtg gacgcgcccg ctcccgcgcc cgcagccgcc
481 aggaaggcca aggtgctgct ggtggtcgac gagccgcacg ccgactgggc caagtgcttt
541 cggggcaaaa aagtccttgg agattatgat atcaaggtgg aacaggcaga attttcagag
601 ctcaacctgg tggcccatgc agatggcacc tatgctgtgg atatgcaggt tctccggaat
661 ggcacaaagg ttgtccggtc cttccggcca gacttcgtgc tcatccggca gcatgcattt
721 ggcatggcgg agaatgagga cttccgccac ctgatcattg gtatgcagta tgcaggcctc
781 cccagcatca actcactgga atccatatac aacttctgtg acaagccatg ggtgtttgcc
841 cagctggtcg ctatctataa gacactggga ggagaaaagt tccctctcat tgaacagaca
901 tactacccca accacaaaga gatgctgaca ctgcccacgt tccctgtggt ggtgaagatt
961 ggccacgctc actcaggcat gggcaaggtc aaagtggaaa accactacga cttccaggac
1021 attgccagcg tggtggctct cacccagacc tatgccactg cagagccttt cattgactcc
1081 aagtatgaca tccgggtcca gaagattggc aacaactaca aggcttacat gaggacatcg
1141 atctcaggga actggaagac gaacactggc tctgcgatgc tggagcagat tgccatgtca
1201 gacaggtaca aactgtgggt ggacacctgc tctgagatgt ttggcggcct ggacatctgt
1261 gctgtcaaag ctgtacatgg caaagatggg aaagactaca tttttgaggt catggactgt
1321 agcatgccac tgattgggga acatcaggtg gaggacaggc aactcatcac cgaactagtc
1381 atcagcaaga tgaaccagct gctgtccagg actcctgccc tgtctcctca gagaccccta
1441 acaacccagc agccacagag cggaacactt aaggatccgg actcaagcaa gaccccacct
1501 cagcggccac cccctcaagg gggccctggg caaccccaag gaatgcagcc cccaggcaag
1561 gtgctgcctc cacgccggct cccccctgga ccatcactgc caccttcctc ctcttcctcc
1621 tcttcttcct cctcctcggc tcctcagcgg ccgggcggcc ccaccgccca cggagatgca
1681 ccctccagca gcagctccct ggcagaggcc cagccacccc tggctgctcc accacagaag
1741 ccccagcctc acccacagct caacaagtcg cagtccctga caaatgcctt cagcttctct
1801 gagtcctcct tcttccggtc ttcagccaat gaggatgaag ccaaagcgga gaccatccgg
1861 agcttgagga agtcctttgc cagcctcttt tcagattagc tcttcagaca cacggggcac
1921 ccagcccaac cgggaaaggc atctaagaca ttcaccaaca acagtcagcc agcttggtgg
1981 tgatgtccca tgaccttgac gtgtgtggtc ccttcctctg ctctgttgta ctaagtgatg
2041 ttgtgcagcc cagaaaggac catttgacag tctcagggca ggtgcctacc cagcaagggg
2101 tacctggcat cagagaggaa agagctgctt ccctgtagtc atgagagctt ccttctgaag
2161 tcatcgttcg ctgtgagttt agtggcctta ttgtgacagt gccatcatgt cttattcttc
2221 cctgtgaaac caggattaat cgtggactcc tggcagctta acctagctca gttgcagtgc
2281 taagcatgcc ccgcccccat tcagtgatac ctgtttggga agtatatact tccccaaaag
2341 tactcttggc cctaagtttt aggaactttc cccgacctgg atcccttgtc atacctgtgt
2401 tactgtttaa agcacaccca cccaacttac aagatcttag gctgctgtgg tggtgaagca
2461 ccttgagtct gctgatattc gggagaacaa ggatctgcag tttccccttt tctcccctct
2521 gaagagtggt tcttatgtgc aatctgcagt aaccttgaac tccagagctg cactatagag
2581 gagaatgcat gccactatga cagcagtatg ccaagctttg tgttcatctc ctaataaacg
2641 ttaagacctt tggtgtaata aaaaaaaaaa aaaaaaaaaa aa
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