LOCUS BC051236 1081 bp mRNA linear HUM 30-SEP-2003 DEFINITION Homo sapiens Rho GTPase-activating protein, mRNA (cDNA clone IMAGE:6110197), partial cds. ACCESSION BC051236 VERSION BC051236.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1081) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1081) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (18-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: g Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662261. FEATURES Location/Qualifiers source 1..1081 /db_xref="H-InvDB:HIT000259191" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6110197" /tissue_type="Skin, melanoma, melanotic" /clone_lib="NIH_MGC_112" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1081 /gene="RICS" /gene_synonym="GC-GAP" /gene_synonym="GRIT" /gene_synonym="KIAA0712" /gene_synonym="MGC1892" /gene_synonym="p200RhoGAP" /db_xref="GeneID:9743" CDS <1..986 /gene="RICS" /gene_synonym="GC-GAP" /gene_synonym="GRIT" /gene_synonym="KIAA0712" /gene_synonym="MGC1892" /gene_synonym="p200RhoGAP" /codon_start=3 /product="RICS protein" /protein_id="AAH51236.1" /db_xref="GeneID:9743" /translation="LHLCIYDRRFSQLSELPRSDTLKDSPESVTQMLMAYLSRLSAIA GNKINCGPALTWMEIDNKGNHLLVHEESSINTPAVGAAHVIKRYTARAPDELTLEVGD IVSVIDMPPKVLSTWWRGKHGFQVGLFPGHCVELINQKVPQSVTNSVPKPVSKKHGKL ITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYG IVDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLL TYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRSATVGKYQAEVEVG" misc_feature 252..413 /gene="RICS" /gene_synonym="GC-GAP" /gene_synonym="GRIT" /gene_synonym="KIAA0712" /gene_synonym="MGC1892" /gene_synonym="p200RhoGAP" /note="SH3; Region: Src homology 3 domains" /db_xref="CDD:smart00326" misc_feature 606..941 /gene="RICS" /gene_synonym="GC-GAP" /gene_synonym="GRIT" /gene_synonym="KIAA0712" /gene_synonym="MGC1892" /gene_synonym="p200RhoGAP" /note="RhoGAP; Region: GTPase-activator protein for Rho-like GTPases" /db_xref="CDD:smart00324" BASE COUNT 295 a 262 c 240 g 284 t ORIGIN 1 atcttcatct gtgtatttat gaccgaagat tttcccagct ctcagaactt ccccgttctg 61 acaccctgaa ggacagtcca gagtcggtca ctcagatgct tatggcttac ctgtcacgcc 121 tttcagctat cgctggcaac aagatcaact gtgggcccgc ccttacctgg atggagattg 181 ataataaggg aaatcacctt ttggttcatg aggagtcatc catcaacact cctgctgtcg 241 gtgctgccca tgttatcaag aggtacactg ctcgggcccc tgacgaactg accttagagg 301 tgggagacat tgtttctgtt attgacatgc ccccgaaagt gttaagcaca tggtggagag 361 gcaagcacgg attccaggtg ggactcttcc ctggacactg tgttgagtta attaaccaaa 421 aagttcccca gtcagtgacc aactcagtgc caaaaccagt gtctaaaaag cacggcaagc 481 tcattacgtt cttacgaaca ttcatgaagt ctcgtccaac aaaacagaag ctgaagcagc 541 ggggaatctt gaaagagagg gtgtttggtt gtgacctggg ggagcacctt ctaaattctg 601 gttttgaagt gccgcaggtt cttcaaagct gcacagcatt cattgagaga tatggcatcg 661 tggatggaat ctatcgcctt tctggtgttg cctccaatat ccagagacta cgccatgaat 721 ttgactctga gcacgtcccc gacctgacga aagaaccgta tgttcaggac atccattctg 781 tgggttccct atgtaagctg tacttccggg aactcccaaa ccctctgctt acctaccagc 841 tgtatgagaa attttctgat gcagtttcag cagcaacaga tgaagaaagg ctgataaaaa 901 tccacgatgt catccagcag ctccccccac cacactacag gtcagccaca gtgggtaaat 961 accaggcaga ggtagaagtc ggttgacctg taaacgtttt tttttccttt ggatttctat 1021 ttaaacttcc ttggagttct aattaaactt ccatttcata tataaaaaaa aaaaaaaaaa 1081 a //