LOCUS       BC050738                1640 bp    mRNA    linear   HUM 07-OCT-2003
DEFINITION  Homo sapiens cleavage and polyadenylation specific factor 4, 30kDa,
            mRNA (cDNA clone MGC:60384 IMAGE:6199123), complete cds.
ACCESSION   BC050738
VERSION     BC050738.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. James R. Lupski
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 110 Row: n Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5729938.
FEATURES             Location/Qualifiers
     source          1..1640
                     /db_xref="H-InvDB:HIT000053583"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:60384 IMAGE:6199123"
                     /tissue_type="Peripheral Nervous System, sympathetic
                     trunk"
                     /clone_lib="Lupski_sympathetic_trunk"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1640
                     /gene="CPSF4"
                     /gene_synonym="CPSF30"
                     /gene_synonym="NAR"
                     /gene_synonym="NEB1"
                     /db_xref="GeneID:10898"
                     /db_xref="MIM:603052"
     CDS             107..838
                     /gene="CPSF4"
                     /gene_synonym="CPSF30"
                     /gene_synonym="NAR"
                     /gene_synonym="NEB1"
                     /codon_start=1
                     /product="CPSF4 protein"
                     /protein_id="AAH50738.1"
                     /db_xref="GeneID:10898"
                     /db_xref="MIM:603052"
                     /translation="MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFF
                     LKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKF
                     GECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGP
                     SCKFMHPRFELPMGTTEQPPLPQQTQPPAKRTPQVIGVMQSQNSSAGNRGPRPLEQVT
                     CYKCGEKGHYANRCTKGHLAFLSGQ"
     misc_feature    179..622
                     /gene="CPSF4"
                     /gene_synonym="CPSF30"
                     /gene_synonym="NAR"
                     /gene_synonym="NEB1"
                     /note="YTH1; Region: COG5084, YTH1, Cleavage and
                     polyadenylation specificity factor (CPSF) Clipper subunit
                     and related makorin family Zn-finger proteins [General
                     function prediction only]"
                     /db_xref="CDD:COG5084"
     misc_feature    704..802
                     /gene="CPSF4"
                     /gene_synonym="CPSF30"
                     /gene_synonym="NAR"
                     /gene_synonym="NEB1"
                     /note="COG5222; Region: COG5222, Uncharacterized conserved
                     protein, contains RING Zn-finger [General function
                     prediction only]"
                     /db_xref="CDD:COG5222"
BASE COUNT          407 a          416 c          470 g          347 t
ORIGIN      
        1 ggcgaagcga aggaggagtg tgtgcggcgg ggccggcggc gggtaaaggc gagaaggctg
       61 caggagaccg agggggagcc gggccggtgg ggccgccgcc gccgccatgc aggaaatcat
      121 cgccagcgtg gaccacatca agtttgactt ggagatcgcg gtggagcagc agctgggggc
      181 gcagccgctg cccttccccg gcatggacaa gtcgggcgct gctgtctgtg aattcttttt
      241 gaaagctgcc tgcggcaaag ggggcatgtg tccgtttcgc cacatcagtg gtgagaagac
      301 agttgtgtgc aaacactggc tgcgtggcct atgcaagaaa ggggaccagt gtgagttcct
      361 gcatgagtat gacatgacca agatgcccga gtgctacttc tactccaagt tcggggagtg
      421 cagcaacaag gaatgtccct tcctgcacat cgaccccgag tccaagatca aggactgtcc
      481 ttggtatgac cgcggcttct gcaagcacgg tcccctctgc aggcaccggc acacacggag
      541 agtcatctgt gtgaattacc tcgtgggatt ctgcccggag gggccctcgt gtaaattcat
      601 gcaccctcga tttgaactgc ccatgggaac caccgagcag cccccactgc cacagcagac
      661 acagcctcca gcaaagagaa ccccgcaggt catcggggtc atgcagagtc aaaacagcag
      721 cgcgggcaac cggggacccc ggccactgga gcaggtcacc tgttacaagt gtggcgagaa
      781 aggacactac gccaacagat gcaccaaagg gcacttggcc tttctcagtg gacagtgaca
      841 gcagctggag ccagctccga gcagcccggg ggccccgctg ttgggagtgt gcatttaact
      901 gtttcatgcg cttgttggcg cgactgtggc tcgagctggc ccgcagacac gtgggtttca
      961 tcactctgag gggccacgtc tgttagtttc ctatcatttt gccgtagtat tttttgaaaa
     1021 agggacatgt gtcctgtggg tccctgcagt cgacatcatg tttggctggg catcgatgcc
     1081 tcctttctgg gactcccggc acaactccct gccctgctga atcctaaagc tgtgcctata
     1141 tctgtgattt gaatgaggga gccctttggg gcaaattcag gtgcccccat tgcctcaggc
     1201 tggccctggt cccaggtggc agcggttgag gaggggtaca gggctctcaa gcctgaggtt
     1261 ttcttctctg ggcttaattt tctcttgggg tacgtgcctg acagtgttta aggtgtccgt
     1321 tgaactggag ttgcagactt ttaaatagat gaccccttca gatcatctgt gcctacctcc
     1381 tgcccatcag gcgtctacac tgtcactcag acacctgtgg catgtggagg agactgccct
     1441 gtcctgagcc tggaaaatgt gaaactgtct cctgcaacct gctgggcatg tgggcctggc
     1501 tgtgttcaat tgcaagaaca atttttatga aatggattaa agcttgtttt ttaaaaaaaa
     1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1621 aaaaaaaaaa aaaaaaaaaa
//