LOCUS BC050684 2417 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens galactosamine (N-acetyl)-6-sulfate sulfatase, mRNA
(cDNA clone MGC:60259 IMAGE:6091623), complete cds.
ACCESSION BC050684
VERSION BC050684.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2417)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2417)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61698137.
FEATURES Location/Qualifiers
source 1..2417
/db_xref="H-InvDB:HIT000259172"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60259 IMAGE:6091623"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2417
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
CDS 79..1647
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/codon_start=1
/product="galactosamine (N-acetyl)-6-sulfate sulfatase"
/protein_id="AAH50684.2"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
/translation="MAAVVAATRWWQLLLVLSAAGMGASGAPQPPNILLLLMDDMGWG
DLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRLPIRNGFYTTNA
HARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRPQFHPLKHGFDEWF
GSPNCHFGPYDNKARPNIPVYRDWEMVGRYYEEFPINLKTGEANLTQIYLQEALDFIK
RQARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGDAVREIDDSIGKILELLQDLH
VADNTFVFFTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTAGQ
VSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYYRGDTLMA
ATLGQHKAHFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGE
RFPLSFASAEYQEALSRITSVVQQHQEALVPAQPQLNVCNWAVMNWAPPGCEKLGKCL
TPPESIPKKCLWSH"
BASE COUNT 557 a 736 c 661 g 463 t
ORIGIN
1 cgcagcccag ccggaagggc cggcggacgc tcgctaggtc ggctcgctgg ccggggctcc
61 gcggctcccg tggttgccat ggcggcggtt gtcgcggcga cgaggtggtg gcagctgttg
121 ctggtgctca gcgccgcggg gatgggggcc tcgggcgccc cgcagccccc caacatcctg
181 ctcctgctca tggacgacat gggatggggt gacctcgggg tgtatggaga gccctccaga
241 gagaccccga atttggaccg gatggctgca gaagggctgc ttttcccaaa cttctattct
301 gccaaccctc tgtgctcgcc atcgagggcg gcactgctca caggacggct acccatccgc
361 aatggcttct acaccaccaa cgcccatgcc agaaacgcct acacaccgca ggagattgtg
421 ggcggcatcc cagactcgga gcagctcctg ccggagcttc tgaagaaggc cggctacgtc
481 agcaagattg tcggcaagtg gcatctgggt cacaggcccc agttccaccc cctgaagcac
541 ggatttgatg agtggtttgg atcccccaac tgccactttg gaccttatga caacaaggcc
601 aggcccaaca tccctgtgta cagggactgg gagatggttg gcagatatta tgaagaattt
661 cctattaatc tgaagacggg ggaagccaac ctcacccaga tctacctgca ggaagccctg
721 gacttcatta agagacaggc acggcaccac ccctttttcc tctactgggc tgtcgacgcc
781 acgcacgcac ccgtctatgc ctccaaaccc ttcttgggca ccagtcagcg agggcggtat
841 ggagacgccg tccgggagat tgatgacagc attgggaaga tactggagct cctccaagac
901 ctgcacgtcg cggacaacac cttcgtcttc ttcacgtcgg acaacggcgc tgccctcatt
961 tccgcccccg aacaaggtgg cagcaacggc ccctttctgt gtgggaagca gaccacgttt
1021 gaaggaggga tgagggagcc tgccctcgca tggtggccag ggcacgtcac tgcaggccag
1081 gtgagccacc agctgggcag catcatggac ctcttcacca ccagcctggc ccttgcgggc
1141 ctgacgccgc ccagcgacag ggccattgat ggcctcaacc tcctccccac cctcctgcag
1201 ggccggctga tggacaggcc tatcttctat taccgtggcg acacgctgat ggcggccacc
1261 ctcgggcagc acaaggctca cttctggacc tggaccaact cctgggagaa cttcagacag
1321 ggcattgatt tctgccctgg gcagaacgtt tcaggggtca caactcacaa tctggaagac
1381 cacacgaagc tgcccctgat cttccacctg ggacgggacc caggggagag gttccccctc
1441 agctttgcca gcgccgagta ccaggaggcc ctcagcagga tcacctcggt cgtccagcag
1501 caccaggagg ccttggtccc cgcgcagccc cagctcaacg tgtgcaactg ggcggtcatg
1561 aactgggcac ctccgggctg tgaaaagtta gggaagtgtc tgacacctcc agaatccatt
1621 cccaagaagt gcctctggtc ccactagcac ctgcgcagac tcaggccagg cctagaatct
1681 ccggttggcc ctgcaagtgc ctggaggaag gatggctctg gcctcggtcc tcccccaacc
1741 ctgcccaagc cagacagaca gcacctgcag acgcaggggg actgcacaat tccacctgcc
1801 caggacctga ccctggcgtg tgcttggccc tcctcctcgc ccacggcgcc tcagatttca
1861 ggaccctcct cctcgcccac ggcgcctcag acctcaggac cctgccgtct cacgcctttg
1921 tgaaccccaa atatctgaga ccagtctcag tttattttgc caaggttaag gatgcacctg
1981 tgacagcctc aggaggtcct gacaacaggt gcctgaggtg gctggggata cagtttgcct
2041 ttatacatct tagggagaca caagatcagt atgtgtatgg cgtacattgg ttcagtcagc
2101 cttccactga atacacgatt gagtctggcc cagtgaatcc gcatttttat gtaaacagta
2161 agggaacggg gcaatcatat aagcgtttgt ctcaggggag ccccagaggg atgacttcca
2221 gttccgtctg tcctttgtcc acaaggaatt tccctggacg ctaattatga gggaggcgtg
2281 tagcttctta tcattgtaac tatgttattt agaaataaaa cgggaggcag gtttgcctaa
2341 ttcccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaa
//