LOCUS BC050659 1591 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens paternally expressed 10, mRNA (cDNA clone MGC:60171
IMAGE:6197322), complete cds.
ACCESSION BC050659
VERSION BC050659.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1591)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1591)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC050659.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149662.
FEATURES Location/Qualifiers
source 1..1591
/db_xref="H-InvDB:HIT000053543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60171 IMAGE:6197322"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1591
/gene="PEG10"
/gene_synonym="Edr"
/gene_synonym="HB-1"
/gene_synonym="KIAA1051"
/gene_synonym="MEF3L"
/db_xref="GeneID:23089"
CDS 412..1389
/gene="PEG10"
/gene_synonym="Edr"
/gene_synonym="HB-1"
/gene_synonym="KIAA1051"
/gene_synonym="MEF3L"
/codon_start=1
/product="PEG10 protein"
/protein_id="AAH50659.1"
/db_xref="GeneID:23089"
/translation="MTERRRDELSEEINNLREKVMKQSEENNNLQSQVQKLTEENTTL
REQVEPTPEDEDDDIELRGAAAAAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQI
FMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFED
PQRREVAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEEL
SHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPPRALVLPHIASHHQVDPTEPVGG
ARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPAPL"
misc_feature 766..1047
/gene="PEG10"
/gene_synonym="Edr"
/gene_synonym="HB-1"
/gene_synonym="KIAA1051"
/gene_synonym="MEF3L"
/note="Retrotrans_gag; Region: Retrotransposon gag
protein. Gag or Capsid-like proteins from LTR
retrotransposons. There is a central motif
QGXXEXXXXXFXXLXXH that is common to Retroviridae
gag-proteins, but is poorly conserved"
/db_xref="CDD:pfam03732"
BASE COUNT 498 a 445 c 404 g 244 t
ORIGIN
1 tgtgtgtcga agaaacctga ctgcgccctg aggagaacag cggagaaggt ccaccgagcc
61 tggcgaaagg tccgctgagc gggctgtcgt ccggagccac tccgggctgc ggagcaccca
121 gtggagaccg cgcctggctc aggtgtggga ccccatcctt cctgtcttcg cagaggagtc
181 ctcgcgtgaa ataagcgggt tttgaaaaca aaaaaaagaa ggagtggaag agggggccag
241 gatccaggcc tccatcccca cagaagtgaa gctacagctg ggaggtctcc tcccacccca
301 accgtcaccc tgggtcccga ctgcccacct cctcctcctc cccctccccc caacaacaac
361 aacaacaaca actccaagca caccggccat aagagtgcgt gtgtccccaa catgaccgaa
421 cgaagaaggg acgagctctc tgaagagatc aacaacttaa gagagaaggt catgaagcag
481 tcggaggaga acaacaacct gcagagccag gtgcagaagc tcacagagga gaacaccacc
541 cttcgagagc aagtggaacc cacccctgag gatgaggatg atgacatcga gctccgcggt
601 gctgcagcag ctgctgcccc accccctcca atagaggaag agtgcccaga agacctccca
661 gagaagttcg atggcaaccc agacatgctg gctcctttca tggcccagtg ccagatcttc
721 atggaaaaga gcaccaggga tttctcagtt gatcgtgtcc gtgtctgctt cgtgacaagc
781 atgatgaccg gccgtgctgc ccgttgggcc tcagcaaagc tggagcgctc ccactacctg
841 atgcacaact acccagcttt catgatggaa atgaagcatg tctttgaaga ccctcagagg
901 cgagaggttg ccaaacgcaa gatcagacgc ctgcgccaag gcatggggtc tgtcatcgac
961 tactccaatg ctttccagat gattgcccag gacctggatt ggaacgagcc tgcgctgatt
1021 gaccagtacc acgagggcct cagcgaccac attcaggagg agctctccca cctcgaggtc
1081 gccaagtcgc tgtctgctct gattgggcag tgcattcaca ttgagagaag gctggccagg
1141 gctgctgcag ctcgcaagcc acgctcgcca ccccgggcgc tggtgttgcc tcacattgca
1201 agccaccacc aggtagatcc aaccgagccg gtgggaggtg cccgcatgcg cctgacgcag
1261 gaagaaaaag aaagacgcag aaagctgaac ctgtgcctct actgtggaac aggaggtcac
1321 tacgctgaca attgtcctgc caaggcctca aagtcttcgc cggcgggaaa ctccccggcc
1381 ccgctgtaga gggaccttca gcgaccgaac cagcttaggc aaaagagtcc ccacaagatg
1441 aaaataaaga tcctagttac cattcaaagg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//