LOCUS BC050655 2138 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens PHD finger protein 20-like 1, mRNA (cDNA clone
IMAGE:6502456), partial cds.
ACCESSION BC050655
VERSION BC050655.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2138)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2138)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: o Column: 19.
FEATURES Location/Qualifiers
source 1..2138
/db_xref="H-InvDB:HIT000099251"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6502456"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2138
/gene="PHF20L1"
/gene_synonym="CGI-72"
/db_xref="GeneID:51105"
/db_xref="HGNC:HGNC:24280"
CDS <1..1218
/gene="PHF20L1"
/gene_synonym="CGI-72"
/codon_start=1
/product="PHF20L1 protein"
/protein_id="AAH50655.4"
/db_xref="GeneID:51105"
/db_xref="HGNC:HGNC:24280"
/translation="SMFTEKTTTYQYPRAILSVDLSGENLSDVDFLDDSSTESLLLSG
DEYNQDFDSTNFEESQDEDDALNEIVRCICEMDEENGFMIQCEECLCWQHSVCMGLLE
ESIPEQYICYICRDPPGQRWSAKYRYDKEWLNNGRMCGLSFFKENYSHLNAKKIVSTH
HLLADVYGVTEVLHGLQLKIGILKNKHHPDLHLWACSGKRKDQDQIIAGVEKKIAQDT
VNREEKKYVQNHKEPPRLPLKMEGTYITSEHSYQKPQSFGQDCKSLADPGSSDDDDVS
SLEEEQEFHMRSKNSLQYSAKEHGMPEKNPAEGNTVFVYNDKKGTEDPGDSHLQWQLN
LLTHIENVQNEVTSRMDLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRHIKQLLID
MGKVQQIATLCSV"
BASE COUNT 735 a 363 c 463 g 577 t
ORIGIN
1 agcatgttta cggagaaaac tacaacctat cagtacccaa gggcaattct atccgttgat
61 cttagtggtg aaaacttatc agatgtagac ttcctagatg attcttcaac ggagagtttg
121 cttctgagtg gggatgaata caatcaggac tttgattcaa ccaattttga ggaatctcag
181 gatgaggatg atgctcttaa tgaaattgtg cgatgtattt gtgagatgga tgaggagaat
241 ggcttcatga tccagtgtga agagtgcttg tgttggcaac acagcgtgtg catggggctg
301 ctggaggaga gcattccaga gcagtacatc tgctatatct gccgggaccc accaggtcag
361 aggtggagtg caaaatatcg ttatgataag gagtggttga ataatgggag aatgtgcggg
421 ttatcatttt tcaaagaaaa ttattctcat ctcaatgcca aaaagatagt ttctacacat
481 cacctgcttg ctgatgtcta tggtgttaca gaagtgctac acgggctaca gctgaagatt
541 ggaatactaa agaataaaca tcatcctgac cttcatctct gggcttgttc cgggaagcga
601 aaagaccaag atcaaataat agctggggtg gagaaaaaaa tagctcaaga cacagttaat
661 cgagaagaaa agaaatatgt acagaaccat aaagaaccac ctcgtttgcc cctaaaaatg
721 gaaggaactt atataacaag tgagcatagc tatcaaaagc cacaaagttt tggtcaggac
781 tgtaaatctc tcgcagaccc tgggagctca gatgatgatg atgttagtag tttggaagaa
841 gaacaagaat tccacatgag aagtaaaaac agtttacagt actcagcaaa agaacatgga
901 atgcctgaaa agaatccagc tgaagggaat acagtatttg tttataatga taaaaagggc
961 accgaagacc caggagactc acatcttcag tggcagctca atctccttac acacatagaa
1021 aatgtgcaga acgaagttac cagcaggatg gacctaatag aaaaagaagt cgatgttctg
1081 gaaagctggc ttgatttcac aggggagttg gagccaccag atcctcttgc aagattgccc
1141 caacttaaac gccacataaa acagctccta attgacatgg gcaaagtaca gcagatagca
1201 actctttgct ctgtatgaca acagtgaaca cttaatgaaa gaatgtggct ttcttcagtc
1261 aaagcatttt tattatccac gtgatggcta agtggataat ttaaaagctt agtaatgtct
1321 ggtcattcac tgatttgtga tgtcaatagg atggcacctt ggaaagaaaa atgaagaaca
1381 actttatcaa ggaagctagt atttaaaaac aaattcatga gcaagctgca aatgagaatg
1441 tgttatatgc caaggaacaa tgaagtagaa tataatgtat actaagggat ttcaagttct
1501 cagaattttt gagtagttgc ttacgtgaag ctcaagatac ctgtagaaag aaatatggta
1561 tatttgtata gtttttaata gaaagatcta tgtttataaa ccagcacttg gccaaaaaca
1621 aaattgtaaa ggaaatttaa attctggaga attctacagg gttgctctaa gaactgtctt
1681 ctcagcagtt gatccagctg tacggaaatt tagggtattt aaacttttaa aggatcatga
1741 gctgtttctt gggcgatgaa tgttctcaat cagaaaactg acagtagaaa tctcacttct
1801 ggggaaaaca gttgtggaat tcttacttca ttatgaatgt atttaaaaaa caaacaccaa
1861 ataattggaa tatattgcag gcattaagct cattaaaaac aaactggctt gcagaagggt
1921 ccgatgtgcc aagtgatcat gattctgctg gaaagaggat tttaaatatt gtgggagttc
1981 tcccacccta agtcttacat aatgccacca gtccatccaa aacctatata tcacctatac
2041 tatatatatc atatatatag ttgaatggca gtattcaggc tcaacataca gtttgatcct
2101 gagtatgctt ggtgtttgcc ttcaaaaaaa aaaaaaaa
//