LOCUS BC050600 957 bp mRNA linear HUM 10-DEC-2007 DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast), mRNA (cDNA clone MGC:60046 IMAGE:6502901), complete cds. ACCESSION BC050600 VERSION BC050600.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 957) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 957) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: o Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21536483. FEATURES Location/Qualifiers source 1..957 /db_xref="H-InvDB:HIT000053510" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60046 IMAGE:6502901" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..957 /gene="UBE2K" /gene_synonym="E2-25K" /gene_synonym="HIP2" /gene_synonym="HYPG" /gene_synonym="LIG" /db_xref="GeneID:3093" /db_xref="HGNC:HGNC:4914" /db_xref="MIM:602846" CDS 139..741 /gene="UBE2K" /gene_synonym="E2-25K" /gene_synonym="HIP2" /gene_synonym="HYPG" /gene_synonym="LIG" /codon_start=1 /product="ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)" /protein_id="AAH50600.1" /db_xref="GeneID:3093" /db_xref="HGNC:HGNC:4914" /db_xref="MIM:602846" /translation="MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIA GPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAA AMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSP EYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLSN" BASE COUNT 307 a 177 c 247 g 226 t ORIGIN 1 ccggggtggt agtggcagtg ttcgtgtgct caggtctgaa tcgccgaggg aggaggcggt 61 ggaggaagag gtggcggcgg tggcggtggt cgtagcggtg gcggaggagg cgggtacgaa 121 tcagctgcgg gcggagacat ggccaacatc gcggtgcagc gaatcaagcg ggagttcaag 181 gaggtgctga agagcgagga gacgagcaaa aatcaaatta aagtagatct tgtagatgag 241 aattttacag aattaagagg agaaatagca ggacctccag acacaccata tgaaggagga 301 agataccaac tagagataaa aataccagaa acatacccat ttaatccccc taaggtccgg 361 tttatcacta aaatatggca tcctaatatt agttccgtca caggggctat ttgtttggat 421 atcctgaaag atcaatgggc agctgcaatg actctccgca cggtattatt gtcattgcaa 481 gcactattgg cagctgcaga gccagatgat ccacaggatg ctgtagtagc aaatcagtac 541 aaacaaaatc ccgaaatgtt caaacagaca gctcgacttt gggcacatgt gtatgctgga 601 gcaccagttt ctagtccaga atacaccaaa aaaatagaaa acctatgtgc tatgggcttt 661 gataggaatg cagtaatagt ggccttgtct tcaaaatcat gggatgtaga gactgcaaca 721 gaattgcttc tgagtaactg aggcatagag agctgctgat atagtcaagc ttgcctcttc 781 ttgaggagca ccaacatctg ttatttttag gattctgcat agatttcttt taaactggca 841 ttcttgccta atgatgttat ctaggcacca ttggagactg aaaaaaaaaa atccctgctc 901 tgtaaataaa gctaattaaa cgtctgtgtg taaatttaaa aaaaaaaaaa aaaaaaa //