LOCUS BC050592 2023 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens solute carrier family 47, member 1, mRNA (cDNA clone
IMAGE:5186314), partial cds.
ACCESSION BC050592
VERSION BC050592.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2023)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2023)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907059.
FEATURES Location/Qualifiers
source 1..2023
/db_xref="H-InvDB:HIT000259150"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5186314"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2023
/gene="SLC47A1"
/gene_synonym="MATE1"
/db_xref="GeneID:55244"
/db_xref="HGNC:HGNC:25588"
/db_xref="MIM:609832"
CDS <1..1821
/gene="SLC47A1"
/gene_synonym="MATE1"
/codon_start=1
/product="SLC47A1 protein"
/protein_id="AAH50592.1"
/db_xref="GeneID:55244"
/db_xref="HGNC:HGNC:25588"
/db_xref="MIM:609832"
/translation="PASAVPTAGLRATRPQRASHMEAPEEPAPVRGGPEATLEVRGSR
CLRLSAFREELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVIN
VTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHI
LLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVN
ALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDW
ASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSV
AASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDII
NLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFA
TTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKKACQQAQVHANLKVNNVPRSGNSAL
PQDPLHPGCPENLEGILTNDVGKTGEPQSDQQMRQEEPLPEHPQDGAKLSRKQLVLRR
GLLLLGVFLILLAGVRWCDHSSLQPRTLGLQAILLCQPPE"
BASE COUNT 411 a 558 c 544 g 510 t
ORIGIN
1 ccggcctccg cggtacccac tgccggcctc cgcgctaccc ggccgcagcg cgcgagtcac
61 atggaagctc ctgaggagcc cgcgccagtg cgcggaggcc cggaggccac ccttgaggtc
121 cgtgggtcgc gctgcttgcg gctgtccgcc ttccgagaag agctgcgggc gctcttggtc
181 ctggctggcc ccgcgttctt ggttcagctg atggtgttcc tgatcagctt cataagctcc
241 gtgttctgtg gccacctggg caagctggag ctggatgcag tcacgctggc aatcgcggtt
301 atcaatgtca ctggtgtctc agtgggattc ggcttatctt ctgcctgtga caccctcatc
361 tcccagacgt acgggagcca gaacctgaag cacgtgggcg tgatcctgca gcggagtgcg
421 ctcgtcctgc tcctctgctg cttcccctgc tgggcgctct ttctcaacac ccagcacatc
481 ctgctgctct tcaggcagga cccagatgtg tccaggctta cccagaccta tgtcacgatc
541 ttcattccag ctcttcctgc aacctttctt tatatgttac aagttaaata tttgctcaac
601 cagggaattg tactgcccca gatcgtaact ggagttgcag ccaaccttgt caatgccctc
661 gccaactatc tgtttctcca tcaactgcat cttggggtga taggctctgc actggcaaac
721 ttgatttccc agtacaccct ggctctactc ctctttctct acatcctcgg gaaaaaactg
781 catcaagcta catggggagg ctggtccctc gagtgcctgc aggactgggc ctccttcctc
841 cgcctggcca tccccagcat gctcatgctg tgcatggagt ggtgggccta tgaggtcggg
901 agcttcctca gtggcatcct cggcatggtg gagctgggcg ctcagtccat cgtgtatgaa
961 ctggccatca ttgtgtacat ggtccctgca ggcttcagtg tggctgccag tgtccgggta
1021 ggaaacgctc tgggtgctgg agacatggag caggcacgga agtcctctac cgtttccctg
1081 ctgattacag tgctctttgc tgtagccttc agtgtcctgc tgttaagctg taaggatcac
1141 gtggggtaca tttttactac cgaccgagac atcattaatc tggtggctca ggtggttcca
1201 atttatgctg tttcccacct ctttgaagct cttgcttgca cgagtggtgg tgttctgagg
1261 gggagtggaa atcagaaggt tggagccatt gtgaatacca ttgggtacta tgtggttggc
1321 ctccccatcg ggatcgcgct gatgtttgca accacacttg gagtgatggg tctgtggtca
1381 gggatcatca tctgtacagt ctttcaagct gtgtgttttc taggctttat tattcagcta
1441 aattggaaaa aagcctgtca gcaggctcag gtacacgcca atttgaaagt aaacaacgtg
1501 cctcggagtg ggaattctgc tctccctcag gatccgcttc acccagggtg ccctgaaaac
1561 cttgaaggaa ttttaacgaa cgatgttgga aagacaggcg agcctcagtc agatcagcag
1621 atgcgccaag aagaaccttt gccggaacat ccacaggacg gcgctaaatt gtccaggaaa
1681 cagctggtgc tgcggcgagg gcttctgctc ctgggggtct tcttaatctt gctggctgga
1741 gtgcggtggt gcgatcatag ctcactgcag cctcgaactc ttgggcttca agcaatcctc
1801 ctgtgtcagc caccagagta gctgagacta cagggctggt gaaactgcgt gctgtaagct
1861 gggaccagct ttgtccataa ctgctgagag aacttgctga agctctagga ataattttgc
1921 ctgcccggtt gctcaccagt tgtagcttgc cagctcccaa cacccttcct ggtgccaata
1981 aactttctca aagagcaaaa aaaaaaaaaa aaaaaaaaaa aaa
//