LOCUS BC050576 2185 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 98, mRNA (cDNA clone
MGC:57797 IMAGE:5744517), complete cds.
ACCESSION BC050576
VERSION BC050576.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2185)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2185)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377569.
FEATURES Location/Qualifiers
source 1..2185
/db_xref="H-InvDB:HIT000053500"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57797 IMAGE:5744517"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2185
/gene="C9orf98"
/gene_synonym="DDX31"
/gene_synonym="FLJ32704"
/gene_synonym="RP11-143F18.1"
/db_xref="GeneID:158067"
/db_xref="HGNC:HGNC:26526"
CDS 557..1996
/gene="C9orf98"
/gene_synonym="DDX31"
/gene_synonym="FLJ32704"
/gene_synonym="RP11-143F18.1"
/codon_start=1
/product="chromosome 9 open reading frame 98"
/protein_id="AAH50576.1"
/db_xref="GeneID:158067"
/db_xref="HGNC:HGNC:26526"
/translation="MDATIAPHRIPPEMPQYGEENHIFELMQNMLEQLLIHQPEDPIP
FMIQHLHRDNDNVPRIVILGPPASGKTTIAMWLCKHLNSSLLTLENLILNEFSYTATE
ARRLYLQRKTVPSALLVQLIQERLAEEDCIKQGWILDGIPETREQALRIQTLGITPRH
VIVLSAPDTVLIERNLGKRIDPQTGEIYHTTFDWPPESEIQNRLMVPEDISELETAQK
LLEYHRNIVRVIPSYPKILKVISADQPCVDVFYQALTYVQSNHRTNAPFTPRVLLLGP
VGSGKSLQAALLAQKYRLVNVCCGQLLKEAVADRTTFGELIQPFFEKEMAVPDSLLMK
VLSQRLDQQDCIQKGWVLHGVPRDLDQAHLLNRLGYNPNRVFFLNVPFDSIMERLTLR
RIDPVTGERYHLMYKPPPTMEIQARLLQNPKDAEEQVKLKMDLFYRNSADLEQLYGSA
ITLNGDQDPYTVFEYIESGIINPLPKKIP"
BASE COUNT 572 a 631 c 597 g 385 t
ORIGIN
1 cttggccaga gccggggagc tgggaggggt ctaccggggc tcgactctag gagttgggct
61 gaggatttcc acccgatcct cgaacctccg gcccatctca tggacgcccc tcccccttca
121 aacaccctcc cccacattta ttcccgcgtc tgttttaaag atgggtaaac tgaggcacag
181 ggagccgggc cggggagcac tgacagaacc agaagcaggt tctgcctccc gtcccctcgg
241 agggccgact tgccccttct gggtttcgtc gggggtctca gatacgagga ggcccagctg
301 gaagccacct gagggtgtcc cccgctaaga tgcgcaaatg ggaaaagcga ggccggggtt
361 ggggaaagaa cttgcccgag ccgcagagcg cgtcagccgg ggaggtcggg gcgggggcga
421 cccgcgcgac cgaggatcgg gtatctgggc ccggcgcgga gcctgcaggg cggggccgcg
481 gcgcgtgctg atgacgcagt cggcgcggcg gccctagcga cgcggttact agggagcggc
541 gagccgagac ggctacatgg acgccactat cgccccgcac cgtatccccc ccgagatgcc
601 ccagtacggg gaggagaacc acatcttcga gttgatgcag aacatgctgg agcaactcct
661 gatccaccag cccgaagatc ccatcccctt catgatccag cacttgcata gagacaacga
721 caatgtgccc aggattgtaa tattaggtcc acccgcctca gggaaaacaa caatagcaat
781 gtggctctgc aaacatctga acagcagtct cctcaccctg gagaacctga tcttaaatga
841 gttttcctat acggccaccg aagccagaag gctttatctg caaaggaaga cagttcccag
901 cgcgctgctc gtccagctga ttcaggaacg cctggctgaa gaggattgca tcaagcaggg
961 ctggattctg gatggcatcc ctgagacgcg tgagcaggct ctgaggatcc agaccctggg
1021 gatcacaccc agacacgtca ttgtgctgag tgctccagac acggtcctga tcgagagaaa
1081 cttggggaag agaatcgacc ctcaaactgg agagatttat cacaccacct ttgactggcc
1141 acccgaatct gaaatccaga accgtctcat ggtgccagag gacatctcag agctggagac
1201 ggctcagaaa ctgctggagt atcataggaa catcgtcagg gtcattccct cctaccccaa
1261 aatcctcaaa gtcatcagtg ctgaccagcc atgtgtggac gtcttctacc aggctctgac
1321 ctatgtccaa agcaaccatc gtactaatgc cccgttcacc ccgagggtgc tgctgctcgg
1381 gcctgtgggc agtgggaaaa gtctgcaggc cgccctcctg gcccagaaat acaggcttgt
1441 caatgtctgc tgtgggcaac tgctgaaaga ggctgtggca gataggacca cgtttggcga
1501 gctcatccag cccttctttg aaaaggagat ggcagttcct gacagcctcc tcatgaaggt
1561 gctgagccag cgcctggacc agcaggactg catccagaaa ggctgggtgc tacacggcgt
1621 cccgcgggac ctcgaccagg cacacctgct gaaccgcctg ggctacaatc ccaacagggt
1681 gtttttcctg aatgtgccat ttgattccat catggagcgg ctgactctga gaagaattga
1741 tccagtcact ggggaaaggt accacctcat gtacaagcca cctcccacca tggagatcca
1801 ggctcgcctc ctgcagaacc caaaggatgc tgaagagcag gtcaagctga aaatggacct
1861 gttctacagg aactcagctg acttggagca gttgtatggg tcggccatca ccctcaatgg
1921 ggaccaggac ccatacacag tcttcgaata catcgagagt gggatcatta atcccctgcc
1981 caagaaaatc ccctgatggg ttcagagcca ggagcgctgc cccagggaaa gagttaatcc
2041 cctgccccca gccccccagc ctcggcacag ctcccctaaa aagccaataa agcctgctgg
2101 atacagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaa
//