LOCUS BC050566 1606 bp mRNA linear HUM 08-DEC-2006 DEFINITION Homo sapiens bromodomain PHD finger transcription factor, mRNA (cDNA clone IMAGE:3870623), partial cds. ACCESSION BC050566 VERSION BC050566.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1606) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1606) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: a Column: 10. FEATURES Location/Qualifiers source 1..1606 /db_xref="H-InvDB:HIT000259141" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3870623" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1606 /gene="BPTF" /gene_synonym="FAC1" /gene_synonym="NURF301" /db_xref="GeneID:2186" /db_xref="HGNC:HGNC:3581" /db_xref="MIM:601819" CDS <1..725 /gene="BPTF" /gene_synonym="FAC1" /gene_synonym="NURF301" /codon_start=3 /product="BPTF protein" /protein_id="AAH50566.1" /db_xref="GeneID:2186" /db_xref="HGNC:HGNC:3581" /db_xref="MIM:601819" /translation="DTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMD VYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEAELID EYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYG VIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFF VQKLKGFKASRSHNNKLQSTAS" BASE COUNT 522 a 282 c 326 g 476 t ORIGIN 1 aggacacaaa gctttactgt atctgtaaaa cgccttatga tgaatctaag ttctatattg 61 gctgtgatct ttgtactaac tggtatcatg gagaatgtgt tggcatcaca gaaaaggagg 121 ctaagaaaat ggatgtgtac atctgtaatg attgtaaacg ggcacaagag ggcagcagtg 181 aggaattgta ctgtatctgc agaacacctt atgatgagtc acaattttat attggctgtg 241 atcggtgtca gaattggtac catgggcgct gcgttggcat cttgcaaagt gaggcagagc 301 tcattgatga gtatgtctgt ccacagtgcc agtcaacaga ggatgccatg acagtgctca 361 cgccactaac agagaaggat tatgaggggt tgaagagggt gctccgttcc ttacaggccc 421 ataagatggc ctggcctttc cttgaaccag tagaccctaa tgatgcacca gattattatg 481 gtgttattaa ggaacctatg gaccttgcca ccatggaaga aagagtacaa agacgatatt 541 atgaaaagct gacggaattt gtggcagata tgaccaaaat ttttgataac tgtcgttact 601 acaatccaag tgactcccca ttttaccagt gtgcagaagt tctcgaatca ttctttgtac 661 agaaattgaa aggcttcaaa gctagcaggt ctcataacaa caaactgcag tctacagctt 721 cttaaagttc agcgtgttaa cctaacataa aacacagcaa gaatctggtt gtctgaacta 781 ttttaaatta aggagccaga tgtttttagt caggctatcc tgacaagact tgacctaaac 841 ttcgttttta ttggtcataa cagtccaatt atattcttgg ccaattttgt ccaacggaca 901 agaaaaaagc aaagtcaacg acaccattat cttgtcaaga tcagatggtt ttactattgt 961 ggcagaagcg agaaaacttt gtttattgaa aaaaaaagaa aaagaaagca agaaaaaaag 1021 atactatggg gtcaagtgta actccatgga aatgccacgt ctgctcttca gtgaagaagc 1081 tggtttagag tctcacagaa aacttttgac tgtatttatt tattgttgca aaaaagacgc 1141 ttttttattg ctgccctcat ttgtcagcta agtatttttt cttataaaat ccagccccgg 1201 ttacatataa tcatctgtat cttatcatga ttcctgtagg taaaagtaca agacgacctc 1261 tagatgtctt ttctttctat gaaaggagct gctatgtaca catgtgcaca cacacacaac 1321 tgggaatcaa caatgagttt attgttcatg gtagattaaa attaagcttg cataaaggtt 1381 gggctaagtg gtcctggact acagactctg ttgccttgaa tataacagta caatttgtca 1441 attactctgc accaggctaa agtgagtaaa atctatttga aggtatcttg tttgtaaaca 1501 tttgtcagat tctaattttt ttcttttgta ttaaaattca actatggatg tatatgaaac 1561 aaaataaatg gagataattt ttctcccaaa aaaaaaaaaa aaaaaa //