LOCUS BC050464 3611 bp mRNA linear HUM 29-OCT-2007
DEFINITION Homo sapiens chromosome 16 open reading frame 62, mRNA (cDNA clone
MGC:54296 IMAGE:6061139), complete cds.
ACCESSION BC050464
VERSION BC050464.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543158.
FEATURES Location/Qualifiers
source 1..3611
/db_xref="H-InvDB:HIT000053468"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54296 IMAGE:6061139"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3611
/gene="C16orf62"
/gene_synonym="DKFZp434B0212"
/db_xref="GeneID:57020"
/db_xref="HGNC:HGNC:24641"
CDS 56..2947
/gene="C16orf62"
/gene_synonym="DKFZp434B0212"
/codon_start=1
/product="chromosome 16 open reading frame 62"
/protein_id="AAH50464.1"
/db_xref="GeneID:57020"
/db_xref="HGNC:HGNC:24641"
/translation="MAVFPWHSRNRNYKAEFASCRLEAVPLEFGDYHPLKPITVTESK
TKKVNRKGSTSSTSSSSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKR
DRDDNSVVGSDFEPWTNKRGEILARYTTTEKLSINLFMGSEKGKAGTATLAMSEKVRT
RLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLL
SDTSVIQFYPSKFVLITDILDTFGKLVYERIFSMCVDSRSVLPDHFSPENANDTAKET
CLNWFFKIASIRELIPRFYVEASILKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVY
ARAYLCRVGMEVAPHLKETLNKNFFDFLLTFKQIHGDTVQNQLVVQGVELPSYLPLYP
PAMDWIFQCISYHAPEALLTEMMERCKKLGNNALLLNSVMSAFRAEFIATRSMDFIGM
IKECDESGFPKHLLFRSLGLNLALADPPESDRLQILNEAWKVITKLKNPQDYINCAEV
WVEYTCKHFTKREVNTVLADVIKHMTPDRAFEDSYPQLQLIIKKVIAHFHDFSVLFSV
EKFLPFLDMFQKESVRVEVCKCIMDAFIKHQQEPTKDPVILNALLHVCKTMHDSVNAL
TLEDEKRMLSYLINGFIKMVSFGRDFEQQLSFYVESRSMFCNLEPVLVQLIHSVNRLA
METRKVMKGNHSRKTAAFVRACVAYCFITIPSLAGIFTRLNLYLHSGQVALANQCLSQ
ADAFFKAAISLVPEVPKMINIDGKMRPSESFLLEFLCNFFSTLLIVPDHPEHGVLFLV
RELLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKF
LAENNKLCETVMAQILEHLKTLAKDEALKRQSSLGLSFFNSILAHGDLRNNKLNQLSV
NLWHLAQRHGCADTRTMVKTLEYIKKQSKQPDMTHLTELALRLPLQTRT"
BASE COUNT 976 a 878 c 830 g 927 t
ORIGIN
1 aaaaaaaaaa aaaagggcgg ccgctcgcga tctagaacta gtcgtgactg ggaagatggc
61 cgtctttcct tggcactcca ggaataggaa ctacaaagct gaatttgcat catgccgact
121 ggaggctgta ccattggagt ttggggacta tcaccctctg aaacccataa ctgtcacaga
181 gtcaaagaca aagaaagtga accggaaagg aagcacttct tccacgtcct cctcctcctc
241 cagctccgtg gtggacccgc tgagcagcgt cctcgatggg actgaccccc tctccatgtt
301 tgcagccact gctgaccccg cagccttggc agctgccatg gacagctcca gaaggaaacg
361 tgatagagat gataactccg ttgtaggatc ggattttgag ccttggacca acaaacgggg
421 agaaatcctt gcccggtaca ccactaccga aaagctgtct attaatctgt ttatgggatc
481 tgaaaaaggc aaagctggga ctgccacatt ggcaatgtca gagaaggtgc ggacccggct
541 ggaggagctg gatgactttg aggagggttc ccaaaaggag ctgttgaact tgactcagca
601 ggattacgtg aaccgcatag aggagctcaa ccaatcgctg aaggatgcct gggcctcaga
661 ccagaaagtg aaggctctaa aaatagtcat ccagtgttca aagcttcttt cagacaccag
721 tgttattcag ttctacccaa gcaaatttgt ccttatcacc gacatacttg atacatttgg
781 aaagctcgtg tacgagcgca tcttttccat gtgtgtggat agccgcagcg tcttaccaga
841 tcacttttct ccagagaatg caaatgacac ggccaaggaa acatgcctaa attggttttt
901 caagattgcc tccatcaggg aactcattcc aagattttac gtggaggcat ccatcctgaa
961 atgtaacaaa ttcctctcca aaacgggaat ttcagagtgc ctgccccggt tgacatgcat
1021 gatcagaggg atcggagacc cactagtgtc ggtgtatgcc cgtgcctacc tgtgccgggt
1081 gggaatggaa gtggccccac atctcaaaga aaccctaaat aagaactttt ttgacttcct
1141 ccttacgttc aaacagattc atggggatac ggtccagaac cagctggtgg tccaaggagt
1201 ggagctccca tcttacctcc ccttgtaccc gcctgccatg gactggatct tccagtgcat
1261 ctcctaccat gcccccgagg ctctgctgac cgagatgatg gaaaggtgta agaaactagg
1321 aaacaatgcc ttgctgttga attctgtgat gtctgccttc cgggctgagt tcatcgccac
1381 aaggtctatg gatttcattg gcatgattaa agagtgtgat gaatctggtt tccccaagca
1441 tcttcttttt cgatcactgg gattaaactt ggccttggct gatcctcctg agagtgaccg
1501 acttcagatt ctcaacgaag cttggaaagt catcactaag ctgaagaacc cacaggacta
1561 cattaattgt gccgaagtgt gggtggaata cacctgcaag catttcacga aacgagaggt
1621 gaataccgtt ttggcagatg tcatcaagca catgactcca gatcgtgcat ttgaagattc
1681 ctacccccag cttcagttaa taattaagaa agttattgcc cacttccatg acttctcagt
1741 tcttttctca gtggaaaaat ttctgccgtt tctggacatg ttccaaaaag agagtgtgcg
1801 ggtggaggtt tgcaaatgca tcatggacgc ctttatcaag catcaacaag agcccaccaa
1861 ggacccggtc atcttgaatg cccttttgca tgtttgcaag accatgcatg actctgtgaa
1921 tgcactcact cttgaggatg agaaaagaat gctgtcatat ttgattaatg gatttataaa
1981 aatggtttcc tttggccgtg attttgaaca acagctgagt ttttatgttg agtccaggtc
2041 gatgttttgc aatctggagc ctgttcttgt gcagttgatt catagtgtga accggttggc
2101 aatggagaca agaaaagtaa tgaaaggaaa tcattccaga aagacagctg catttgtccg
2161 ggcctgtgtt gcctactgct tcatcaccat cccctccctg gcgggcatct tcacacgtct
2221 caatctctac ctgcattctg gtcaggtggc cttggccaac cagtgcctct cccaagctga
2281 tgcttttttc aaagccgcta taagccttgt tccggaagtt ccaaagatga ttaatattga
2341 tgggaagatg cggccatcgg aatcgttcct tctggaattc ctctgcaatt tcttttctac
2401 tttattaata gttccggatc atcctgaaca tggggtcctg tttcttgttc gagagcttct
2461 caacgtgatc caggactaca cctgggagga caacagcgat gagaaaatcc gcatctacac
2521 ctgcgtcctg catctcctct ccgccatgag ccaggagacg tacctttacc acatagacaa
2581 agtggactcc aacgacagcc tctacggggg agactccaag ttcctggcag aaaacaacaa
2641 gctgtgtgag acggtgatgg ctcagatcct agagcatctg aaaaccctgg ccaaggacga
2701 ggccctgaag cgccagagct cgttgggcct ttccttcttt aacagcatct tggcccatgg
2761 ggacctacgc aacaacaagc tcaaccagct ctccgtcaac ctgtggcacc tggcacagag
2821 gcacggctgt gcagacacca ggaccatggt gaaaacgcta gaatacatca agaagcaaag
2881 caaacaacca gacatgactc atctgacgga gctggccctc agactccctc tgcaaacaag
2941 gacctgaccc ccgggcccat ccccaggctc agggactctg gtgccaaatc cagaaagatc
3001 tgctctgctg ccctgaactc ttacggcaat ttaggtttct catttttctt ttctttttac
3061 atatgtacaa attgttttaa gctttggcct ctatccaggt tattctgaca atgaagaaat
3121 gggagttgtc agagcattaa aatgcaatct tcactaagaa gcagtctctg tgttgtcttt
3181 gcacaagtgg ccttcggtct actcagcccg atctgatggg cctttttagc aagagagaaa
3241 caagaatgca agtaacatct ttcttctctg gaaggtgttt gttttttcat agtttagaaa
3301 taaggacttt aaaagtggac tgcttttcaa agtgccactg ttccagaccc attccattcc
3361 agactttgta ccttaaagtt agagcacacc caaagtctgg aactgtgtta cctgaacccc
3421 tatggaggat ttataaaagg cagaaatagc actccattaa ctctttttcc tatcaaaagc
3481 agctcttgat tggacttaga atctgtgttg gtggatcaaa ggagaaagcg aggtcaaatt
3541 tgagattctc tgtggcttca gtatacagta actgaataaa tgtcctgaag gagaaaaaaa
3601 aaaaaaaaaa a
//