LOCUS BC050451 1601 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens zinc finger (CCCH type), RNA-binding motif and
serine/arginine rich 2, mRNA (cDNA clone MGC:54232 IMAGE:6499970),
complete cds.
ACCESSION BC050451
VERSION BC050451.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1601)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1601)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4827045.
FEATURES Location/Qualifiers
source 1..1601
/db_xref="H-InvDB:HIT000259129"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54232 IMAGE:6499970"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1601
/gene="ZRSR2"
/gene_synonym="U2AF1-RS2"
/gene_synonym="U2AF1RS2"
/gene_synonym="URP"
/db_xref="GeneID:8233"
/db_xref="HGNC:HGNC:23019"
/db_xref="MIM:300028"
CDS 17..1465
/gene="ZRSR2"
/gene_synonym="U2AF1-RS2"
/gene_synonym="U2AF1RS2"
/gene_synonym="URP"
/codon_start=1
/product="zinc finger (CCCH type), RNA-binding motif and
serine/arginine rich 2"
/protein_id="AAH50451.2"
/db_xref="GeneID:8233"
/db_xref="HGNC:HGNC:23019"
/db_xref="MIM:300028"
/translation="MAAPEKMTFPEKPSHKKYRAALKKEKRKKRRQELARLRDSGLSQ
KEEEEDTFIEEQQLEEEKLLERERQRLHEEWLLREQKAQEEFRIKKEKEEAAKKRQEE
QERKLKEQWEEQQRKEREEEEQKRQEKKEKEEALQKMLDQAENELENGTTWQNPEPPV
DFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDD
YDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQS
EEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRN
PNNEFWEANRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRN
GESERKSSRHRGKKSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSCRS
RRSRSQSSSRSRSRGRRRSGNRDRTVQSPKSK"
BASE COUNT 620 a 297 c 431 g 253 t
ORIGIN
1 gggcggtgcc ggcaagatgg ctgcgcccga gaagatgacg tttcccgaga aaccaagcca
61 caaaaagtac agggccgccc tgaagaagga gaaacgaaag aaacgtcggc aggaacttgc
121 tcgactgaga gactcaggac tctcacagaa ggaggaagag gaggacactt ttattgaaga
181 acaacaacta gaagaagaga agctattgga aagagagagg caaagattac atgaggagtg
241 gttgctaaga gagcagaagg cacaagaaga attcagaata aagaaggaaa aggaagaggc
301 ggctaaaaaa cggcaagaag aacaagagag aaagttaaag gaacaatggg aagaacagca
361 gaggaaagag agagaagagg aggagcagaa acgacaggag aagaaagaaa aagaggaagc
421 tttgcagaag atgctggatc aggctgaaaa tgagttggaa aatggtacca catggcaaaa
481 cccagaacca cccgtggatt tcagagtaat ggagaaggat cgagctaatt gtcccttcta
541 cagtaaaaca ggagcttgca gatttggaga tagatgttca cgtaaacata atttcccaac
601 atccagtcct acccttctta ttaagagcat gtttacgacg tttggaatgg agcagtgcag
661 gagggatgac tatgaccctg acgcaagcct ggagtacagc gaggaagaaa cctaccaaca
721 gttcctagac ttctatgagg atgtgttgcc cgagttcaag aacgtgggga aagtgattca
781 gttcaaggtc agctgcaatt tggaacctca cctgaggggc aatgtatatg ttcagtacca
841 gtcggaagaa gaatgccaag cagccctttc tctgtttaac ggacgatggt atgcaggacg
901 acagctgcag tgtgaattct gccccgtgac ccggtggaaa atggcgattt gtggtttatt
961 tgaaatacaa caatgtccaa gaggaaagca ctgcaacttt cttcatgtgt tcagaaatcc
1021 caacaatgaa ttctgggaag ctaatagaga catctacttg tctccagatc ggactggctc
1081 ctcctttggg aagaactccg aaaggaggga gaggatgggc caccacgacg actactacag
1141 caggctgcgg ggaaggagaa accctagtcc agaccactcc tacaaaagaa atggggaatc
1201 cgagaggaaa agtagtcgtc acagggggaa gaaatctcac aaacgcacat caaagagtcg
1261 ggagaggcac aattcacgaa gcagaggaag aaatagggac cgcagcaggg accgcagccg
1321 gggccggggc agccggagcc ggagccggag ccggagctgc aggagccgcc gcagccggag
1381 ccaaagttcc tctaggtccc gaagtcgtgg caggaggagg tcgggtaata gagacagaac
1441 tgttcagagt cccaaatcca aataaactag ttttgttctt aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//