LOCUS BC050450 2479 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens basal cell adhesion molecule (Lutheran blood group),
mRNA (cDNA clone MGC:54226 IMAGE:5754949), complete cds.
ACCESSION BC050450
VERSION BC050450.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61742795.
FEATURES Location/Qualifiers
source 1..2479
/db_xref="H-InvDB:HIT000053461"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54226 IMAGE:5754949"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2479
/gene="BCAM"
/gene_synonym="AU"
/gene_synonym="CD239"
/gene_synonym="MSK19"
/db_xref="GeneID:4059"
/db_xref="HGNC:HGNC:6722"
/db_xref="MIM:111200"
CDS 6..1892
/gene="BCAM"
/gene_synonym="AU"
/gene_synonym="CD239"
/gene_synonym="MSK19"
/codon_start=1
/product="basal cell adhesion molecule (Lutheran blood
group)"
/protein_id="AAH50450.1"
/db_xref="GeneID:4059"
/db_xref="HGNC:HGNC:6722"
/db_xref="MIM:111200"
/translation="MEPPDAPAQARGAPRLLLLAVLLAAHPDAQAEVRLSVPPLVEVM
RGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPY
QLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLS
VMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSL
TSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLHYPTEHVQFWVGSPST
PAGWVREGDTVQLLCRGDGSPSPEYTLFRLQDEQEEVLNVNLEGNLTLEGVTRGQSGT
YGCRVEDYDAADDVQLSKTLELRVAYLDPLELSEGKVLSLPLNSSAVVNCSVHGLPTP
ALRWTKDSTPLGDGPMLSLSSITFDSNGTYVCEASLPTVPVLSRTQNFTLLVQGSPEL
KTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWSQLGGSPAEPIPGRQGWVSSSLT
LKVTSALSRDGISCEASNPHGNKRHVFHFGTVSPQTSQAGVAVMAVAVSVGLLLLVVA
VFYCVRRKGGPCCRQRREKGAPPPGEPGLSHSGSEQPEQTGLLMGGASGGARGGSGGF
GDEC"
BASE COUNT 520 a 834 c 736 g 389 t
ORIGIN
1 tgaacatgga gcccccggac gcaccggccc aggcgcgcgg ggccccgcgg ctgctgttgc
61 tcgcagtcct gctggcggcg cacccagatg cccaggcgga ggtgcgcttg tctgtacccc
121 cgctggtgga ggtgatgcga ggaaagtctg tcattctgga ctgcacccct acgggaaccc
181 acgaccatta tatgctggaa tggttcctta ccgaccgctc gggagctcgc ccccgcctag
241 cctcggctga gatgcagggc tctgagctcc aggtcacaat gcacgacacc cggggccgca
301 gtcccccata ccagctggac tcccaggggc gcctggtgct ggctgaggcc caggtgggcg
361 acgagcgaga ctacgtgtgc gtggtgaggg caggggcggc aggcactgct gaggccactg
421 cgcggctcaa cgtgtttgca aagccagagg ccactgaggt ctcccccaac aaagggacac
481 tgtctgtgat ggaggactct gcccaggaga tcgccacctg caacagccgg aacgggaacc
541 cggcccccaa gatcacgtgg tatcgcaacg ggcagcgcct ggaggtgccc gtagagatga
601 acccagaggg ctacatgacc agccgcacgg tccgggaggc ctcgggcctg ctctccctca
661 ccagcaccct ctacctgcgg ctccgcaagg atgaccgaga cgccagcttc cactgcgccg
721 cccactacag cctgcccgag ggccgccacg gccgcctgga cagccccacc ttccacctca
781 ccctgcacta tcccacggag cacgtgcagt tctgggtggg cagcccgtcc accccagcag
841 gctgggtacg cgagggtgac actgtccagc tgctctgccg gggggacggc agccccagcc
901 cggagtatac gcttttccgc cttcaggatg agcaggagga agtgctgaat gtgaatctcg
961 aggggaactt gaccctggag ggagtgaccc ggggccagag cgggacctat ggctgcagag
1021 tggaggatta cgacgcggca gatgacgtgc agctctccaa gacgctggag ctgcgcgtgg
1081 cctatctgga ccccctggag ctcagcgagg ggaaggtgct ttccttacct ctaaacagca
1141 gtgcagtcgt gaactgctcc gtgcacggcc tgcccacccc tgccctacgc tggaccaagg
1201 actccactcc cctgggcgat ggccccatgc tgtcgctcag ttctatcacc ttcgattcca
1261 atggcaccta cgtatgtgag gcctccctgc ccacagtccc ggtcctcagc cgcacccaga
1321 acttcacgct gctggtccaa ggctcgccag agctaaagac agcggaaata gagcccaagg
1381 cagatggcag ctggagggaa ggagacgaag tcacactcat ctgctctgcc cgcggccatc
1441 cagaccccaa actcagctgg agccaattgg ggggcagccc cgcagagcca atccccggac
1501 ggcagggttg ggtgagcagc tctctgaccc tgaaagtgac cagcgccctg agccgcgatg
1561 gcatctcctg tgaagcctcc aacccccacg ggaacaagcg ccatgtcttc cacttcggca
1621 ccgtgagccc ccagacctcc caggctggag tggccgtcat ggccgtggcc gtcagcgtgg
1681 gcctcctgct cctcgtcgtt gctgtcttct actgcgtgag acgcaaaggg ggcccctgct
1741 gccgccagcg gcgggagaag ggggctccgc cgccagggga gccagggctg agccactcgg
1801 ggtcggagca accagagcag accggccttc tcatgggagg tgcctccgga ggagccaggg
1861 gtggcagcgg gggcttcgga gacgagtgct gagccaagaa cctcctagag gctgtccctg
1921 gacctggagc tgcaggcatc agagaaccag ccctgctcac gccatgcccg cccccgcctt
1981 ccctcttccc tcttccctct ccctgcccag ccctcccttc cttcctctgc cggcaaggca
2041 gggacccaca gtggctgcct gcctccggga gggaaggaga gggagggtgg gtgggtggga
2101 gggggccttc ctccagggaa tgtgactctc ccaggcccca gaatagctcc tggacccaag
2161 cccaaggccc agcctgggac aaggctccga gggtcggctg gccggagcta tttttacctc
2221 ccgcctccct tgctggtccc cccacctgac gtcttgctgc agagtctgac actggattcc
2281 cccccctcac cccgcccctg gtcccactcc tgcccccgcc ctacctccgc cccaccccat
2341 catctgtgga cactggagtc tggaataaat gctgtttgtc acatcaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaa
//