LOCUS BC050433 1755 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens histone deacetylase 8, mRNA (cDNA clone MGC:54166 IMAGE:5761745), complete cds. ACCESSION BC050433 VERSION BC050433.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1755) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1755) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: g Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8923768. FEATURES Location/Qualifiers source 1..1755 /db_xref="H-InvDB:HIT000053454" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:54166 IMAGE:5761745" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1755 /gene="HDAC8" /gene_synonym="RPD3" /db_xref="GeneID:55869" /db_xref="HGNC:HGNC:13315" /db_xref="MIM:300269" CDS 34..1167 /gene="HDAC8" /gene_synonym="RPD3" /codon_start=1 /product="histone deacetylase 8" /protein_id="AAH50433.1" /db_xref="GeneID:55869" /db_xref="HGNC:HGNC:13315" /db_xref="MIM:300269" /translation="MEEPEEPADSGQSLVPVYIYSPEYVSMCDSPAKIPKRASMVHSL IEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDC PATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVG LGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCS FNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDH EFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV" BASE COUNT 531 a 346 c 458 g 420 t ORIGIN 1 ggaaggtggc tgcggaacgg ttttaagcgg aagatggagg agccggagga accggcggac 61 agtgggcagt cgctggtccc ggtttatatc tatagtcccg agtatgtcag tatgtgtgac 121 tccccggcca agatccccaa acgggccagt atggtgcatt ctttgattga agcatatgca 181 ctgcataagc aaatgaggat agttaagcct aaagtggcct ccatggagga gatggccacc 241 ttccacactg atgcttatct gcagcatctc cagaaggtca gccaagaggg cgatgatgat 301 catccggact ccatagaata tgggctaggt tatgactgcc cagccactga agggatattt 361 gactatgcag cagctatagg aggggctacg atcacagctg cccaatgcct gattgacgga 421 atgtgcaaag tagcaattaa ctggtctgga gggtggcatc atgcaaagaa agatgaagca 481 tctggttttt gttatctcaa tgatgctgtc ctgggaatat tacgattgcg acggaaattt 541 gagcgtattc tctacgtgga tttggatctg caccatggag atggtgtaga agacgcattc 601 agtttcacct ccaaagtcat gaccgtgtcc ctgcacaaat tctccccagg atttttccca 661 ggaacaggtg acgtgtctga tgttggccta gggaagggac ggtactacag tgtaaatgtg 721 cccattcagg atggcataca agatgaaaaa tattaccaga tctgtgaaag tgtactaaag 781 gaagtatacc aagcctttaa tcccaaagca gtggtcttac agctgggagc tgacacaata 841 gctggggatc ccatgtgctc ctttaacatg actccagtgg gaattggcaa gtgtcttaag 901 tacatccttc aatggcagtt ggcaacactc attttgggag gaggaggcta taaccttgcc 961 aacacggctc gatgctggac atacttgacc ggggtcatcc tagggaaaac actatcctct 1021 gagatcccag atcatgagtt tttcacagca tatggtcctg attatgtgct ggaaatcacg 1081 ccaagctgcc ggccagaccg caatgagccc caccgaatcc aacaaatcct caactacatc 1141 aaagggaatc tgaagcatgt ggtctagttg acagaaagag atcaggtttc cagagctgag 1201 gagtggtgcc tataatgaag acagcgtgtt tatgcaagca gtttgtggaa tttgtgactg 1261 cagggaaaat ttgaaagaaa ttacttcctg aaaatttcca aggggcatca agtggcagct 1321 ggcttcctgg ggtgaagagg caggcacccc agagtcctca actggaccta ggggaagaag 1381 gagatatccc acatttaaag ttcttattta aaaaaacaca cacacacaaa tgaaattttt 1441 aatctttgaa aattattttt aagcgaattg gggaggggag tattttaatc atcttaaatg 1501 aaacagatca gaagctggat gagagcagtc accagtttgt agggcaggag gcagctgaca 1561 ggcagggttt gggcctcagg accatccagg tggagccctg ggagagaggg tactgatcag 1621 cagactggga ggtggggaga agtccgctgg tgttgtttta gtgttatata tctttggttt 1681 ttttaataaa atctttgaaa acctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1741 aaaaaaaaaa aaaaa //