LOCUS BC050427 1463 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens sterol-C5-desaturase (ERG3 delta-5-desaturase homolog,
S. cerevisiae)-like, mRNA (cDNA clone MGC:54152 IMAGE:6049043),
complete cds.
ACCESSION BC050427
VERSION BC050427.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1463)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1463)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68160940.
FEATURES Location/Qualifiers
source 1..1463
/db_xref="H-InvDB:HIT000053449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54152 IMAGE:6049043"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1463
/gene="SC5DL"
/gene_synonym="ERG3"
/gene_synonym="S5DES"
/gene_synonym="SC5D"
/db_xref="GeneID:6309"
/db_xref="HGNC:HGNC:10547"
/db_xref="MIM:602286"
CDS 32..931
/gene="SC5DL"
/gene_synonym="ERG3"
/gene_synonym="S5DES"
/gene_synonym="SC5D"
/codon_start=1
/product="sterol-C5-desaturase (ERG3 delta-5-desaturase
homolog, S. cerevisiae)-like"
/protein_id="AAH50427.1"
/db_xref="GeneID:6309"
/db_xref="HGNC:HGNC:10547"
/db_xref="MIM:602286"
/translation="MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYI
LYFFCATLSYYFVFDHALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGY
SKLHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIP
TPFASHAFHPIDGFLQSLPYHIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQI
LQPFINGSAHHTDHHMFFDYNYGQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGK
RSSHSGNGCKNEKLFNGEFTKTE"
BASE COUNT 443 a 268 c 279 g 473 t
ORIGIN
1 gcggcggcgg accacctcca ggggctaagt gatggatctt gtactccgtg ttgcagatta
61 ctattttttt acaccatacg tgtatccagc cacatggcca gaagatgaca tcttccgaca
121 agctattagt cttctgattg taacaaatgt tggtgcttac atcctttatt tcttctgtgc
181 aacactgagc tattattttg tcttcgatca tgcattaatg aaacatccac aatttttaaa
241 gaatcaagtc cgtcgagaga ttaagtttac tgtccaggca ttgccatgga taagtattct
301 tactgttgca ctgttcttgc tggagataag aggttacagc aaattacatg atgacctagg
361 agagtttcca tatggattgt ttgaacttgt cgttagtata atatctttcc tctttttcac
421 tgacatgttc atctactgga ttcacagagg ccttcatcat agactggtat ataagcgcct
481 acataaacct caccatattt ggaagattcc tactccattt gcaagtcatg cttttcaccc
541 tattgatggc tttcttcaga gtctacctta ccatatatac ccttttatct ttccattaca
601 caaggtggtt tatttaagtc tgtacatctt ggttaatatc tggacaattt ccattcatga
661 cggtgatttt cgtgtccccc aaatcttaca gccatttatt aatggctcag ctcatcatac
721 agaccatcat atgttctttg actataatta tggacaatat ttcactttgt gggataggat
781 tggcggctca ttcaaaaatc cttcatcctt tgaggggaag ggaccgctca gttatgtgaa
841 ggagatgaca gagggaaagc gcagcagcca ttcaggaaat ggctgtaaga atgaaaaatt
901 attcaatgga gagtttacaa agactgaata gattattgcc cagttattct taagtaagga
961 caaagaagga aatatcatcg tatttctttt ttttaataag gaaaaaataa tctccataca
1021 gtcaagatac atagtaaatg gtatcatttg gaaatcagca tcgtgggcac tgctgaggaa
1081 tgatcctagt ggtaggtcag aagaagatgc tgtgaacacc aggactttaa tcttatgctt
1141 aaaatgccag atgttgttcg ggggacaact tgtatctttc tagcagcaga tctgtagttt
1201 gtatagcctc aacaacaatt ttaaataaga tggagaataa attattgagg ggactaggct
1261 atatgcattt gccttcatcc acccatgttt attaagaatc attgtgctta ataataccaa
1321 gactaagcac cataaccaag aaatactaat gtaaagattg tttcttgttt caggaatggt
1381 taattcttca acgttggtat gataatgata acttgttttg acttgaataa agtactacat
1441 cagtgtggaa aaaaaaaaaa aaa
//