LOCUS BC050427 1463 bp mRNA linear HUM 25-JAN-2007 DEFINITION Homo sapiens sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like, mRNA (cDNA clone MGC:54152 IMAGE:6049043), complete cds. ACCESSION BC050427 VERSION BC050427.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1463) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1463) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: j Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68160940. FEATURES Location/Qualifiers source 1..1463 /db_xref="H-InvDB:HIT000053449" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:54152 IMAGE:6049043" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1463 /gene="SC5DL" /gene_synonym="ERG3" /gene_synonym="S5DES" /gene_synonym="SC5D" /db_xref="GeneID:6309" /db_xref="HGNC:HGNC:10547" /db_xref="MIM:602286" CDS 32..931 /gene="SC5DL" /gene_synonym="ERG3" /gene_synonym="S5DES" /gene_synonym="SC5D" /codon_start=1 /product="sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like" /protein_id="AAH50427.1" /db_xref="GeneID:6309" /db_xref="HGNC:HGNC:10547" /db_xref="MIM:602286" /translation="MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYI LYFFCATLSYYFVFDHALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGY SKLHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIP TPFASHAFHPIDGFLQSLPYHIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQI LQPFINGSAHHTDHHMFFDYNYGQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGK RSSHSGNGCKNEKLFNGEFTKTE" BASE COUNT 443 a 268 c 279 g 473 t ORIGIN 1 gcggcggcgg accacctcca ggggctaagt gatggatctt gtactccgtg ttgcagatta 61 ctattttttt acaccatacg tgtatccagc cacatggcca gaagatgaca tcttccgaca 121 agctattagt cttctgattg taacaaatgt tggtgcttac atcctttatt tcttctgtgc 181 aacactgagc tattattttg tcttcgatca tgcattaatg aaacatccac aatttttaaa 241 gaatcaagtc cgtcgagaga ttaagtttac tgtccaggca ttgccatgga taagtattct 301 tactgttgca ctgttcttgc tggagataag aggttacagc aaattacatg atgacctagg 361 agagtttcca tatggattgt ttgaacttgt cgttagtata atatctttcc tctttttcac 421 tgacatgttc atctactgga ttcacagagg ccttcatcat agactggtat ataagcgcct 481 acataaacct caccatattt ggaagattcc tactccattt gcaagtcatg cttttcaccc 541 tattgatggc tttcttcaga gtctacctta ccatatatac ccttttatct ttccattaca 601 caaggtggtt tatttaagtc tgtacatctt ggttaatatc tggacaattt ccattcatga 661 cggtgatttt cgtgtccccc aaatcttaca gccatttatt aatggctcag ctcatcatac 721 agaccatcat atgttctttg actataatta tggacaatat ttcactttgt gggataggat 781 tggcggctca ttcaaaaatc cttcatcctt tgaggggaag ggaccgctca gttatgtgaa 841 ggagatgaca gagggaaagc gcagcagcca ttcaggaaat ggctgtaaga atgaaaaatt 901 attcaatgga gagtttacaa agactgaata gattattgcc cagttattct taagtaagga 961 caaagaagga aatatcatcg tatttctttt ttttaataag gaaaaaataa tctccataca 1021 gtcaagatac atagtaaatg gtatcatttg gaaatcagca tcgtgggcac tgctgaggaa 1081 tgatcctagt ggtaggtcag aagaagatgc tgtgaacacc aggactttaa tcttatgctt 1141 aaaatgccag atgttgttcg ggggacaact tgtatctttc tagcagcaga tctgtagttt 1201 gtatagcctc aacaacaatt ttaaataaga tggagaataa attattgagg ggactaggct 1261 atatgcattt gccttcatcc acccatgttt attaagaatc attgtgctta ataataccaa 1321 gactaagcac cataaccaag aaatactaat gtaaagattg tttcttgttt caggaatggt 1381 taattcttca acgttggtat gataatgata acttgttttg acttgaataa agtactacat 1441 cagtgtggaa aaaaaaaaaa aaa //