LOCUS BC050426 1700 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB17, member RAS oncogene family, mRNA (cDNA clone
MGC:54136 IMAGE:5761178), complete cds.
ACCESSION BC050426
VERSION BC050426.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11967980.
FEATURES Location/Qualifiers
source 1..1700
/db_xref="H-InvDB:HIT000053448"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54136 IMAGE:5761178"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1700
/gene="RAB17"
/gene_synonym="FLJ12538"
/db_xref="GeneID:64284"
/db_xref="HGNC:HGNC:16523"
CDS 262..900
/gene="RAB17"
/gene_synonym="FLJ12538"
/codon_start=1
/product="RAB17, member RAS oncogene family"
/protein_id="AAH50426.1"
/db_xref="GeneID:64284"
/db_xref="HGNC:HGNC:16523"
/translation="MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDF
KSILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITR
KDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFME
TSAKLNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCCAH"
BASE COUNT 433 a 423 c 517 g 327 t
ORIGIN
1 cttctgggag gagaagaggc ctgaccttgg cgctggggtc cagtgggcgc tgctctggtc
61 cgaggctgct gctcttgacc tctgctctgc ggctgttttc cattggagta gaggctcctc
121 ctgtcctgtc ctgcctgtgg agggaagcaa accttcccct ggaccagaga gaggagaaag
181 cggagacagg tagcaacgct gtggactggt gatgacaggc tcttcagctc cctgcaagtg
241 accgggcctg gggaacaggg catggcacag gcacacagga ccccccagcc cagggctgcc
301 cccagccagc cccgtgtgtt caagctggtt ctcctgggaa gtggctccgt gggtaagtcc
361 agcttggctc ttcggtacgt gaagaacgac ttcaagagta tcctgcctac ggtgggctgt
421 gcgttcttca caaaggtggt ggatgtgggt gccacctctc tgaagcttga gatctgggac
481 acagctggcc aggagaagta ccacagcgtc tgccacctct acttcagggg tgccaacgct
541 gcgcttctgg tgtacgacat caccaggaag gattccttcc tcaaggctca gcagtggctg
601 aaggacctgg aggaggagct gcacccagga gaagtcctgg tgatgctggt gggcaacaag
661 acggacctca gccaggagcg ggaggtgacc ttccaggaag ggaaggagtt tgccgacagc
721 cagaagttgc tgttcatgga aacttcggcc aaactgaacc accaggtgtc ggaggtgttc
781 aatacagtgg cccaagagct actgcagaga agcgacgagg agggccaggc tctacggggg
841 gatgcagctg tggctctgaa caaggggccc gcgaggcagg ccaaatgctg cgcccactag
901 gtgcagccac tcctgggggc tgtggggaag acaccccctg cctgggccat ggccagctct
961 aggtggattc tgattcactg tcaatgctgg gttgctcccg agccctagat gttcctggaa
1021 gttggccccc tttatgaaaa ccacttccca cagccagtgg gaactgccag aggaagatct
1081 ggcgtcacat ggctcccagg aaagtgctgt gccctatccc cactgatacc atctgattcc
1141 ccgatgcctg tgcctgttcc acctggacgg tggccccctc agcctggcag cctctggaca
1201 gagaggaagg aaggattgga aaagtccccg cagcacagcg acggtgggaa gatgccttac
1261 gtctgatctt gatgggggca ctggcctgga gcctgggccc acctgcttct ggggggttgg
1321 ggagcaggcc agatggaggt ggtggtgcca ggaagaaatg gagcgatgac tgactgtggg
1381 gtgggcccag gatttccaca tcttggtgaa gttgcccctg ggaagggcag ctgggggcag
1441 tggcgccagt tcccttccat ggtctcccgg ctggcaatgt ggtgaagctg agtttctgtc
1501 caatgagcag gaagattctg agacatttcg cctgagatat aagttgtact gcgtatgcag
1561 tttttcctcc aaaaattaaa ttgcttttga caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa
//