LOCUS BC050413 2142 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein L3-like, mRNA (cDNA clone MGC:54082
IMAGE:6204847), complete cds.
ACCESSION BC050413
VERSION BC050413.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16579883.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000053441"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54082 IMAGE:6204847"
/tissue_type="Peripheral Nervous System, sciatic nerve"
/clone_lib="Lupski_sciatic_nerve"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2142
/gene="RPL3L"
/db_xref="GeneID:6123"
/db_xref="HGNC:HGNC:10351"
CDS 40..1263
/gene="RPL3L"
/codon_start=1
/product="ribosomal protein L3-like"
/protein_id="AAH50413.1"
/db_xref="GeneID:6123"
/db_xref="HGNC:HGNC:10351"
/translation="MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLT
AFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSF
KTIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVI
RVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVID
VIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHH
RTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLK
GCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQ
KKHLEKETPETSGDL"
BASE COUNT 520 a 561 c 643 g 418 t
ORIGIN
1 gcggcgaggc cccttcctga ccttcaggga tcggccacca tgtcccaccg gaagttttcc
61 gcccctcggc acggacacct gggcttcctg ccccataaga ggagccaccg gcaccggggc
121 aaggtgaaga cgtggccgcg ggatgacccc agccagcccg tgcacctcac ggccttcctg
181 ggctacaagg cgggcatgac ccacaccctg cgggaggtgc accggccggg gctcaaaatt
241 tccaaacggg aggaggtgga ggcggtgaca attgtagaaa cgccgcccct agtggtggtg
301 ggcgtggtgg gctacgtggc cacccctcga ggtctccgga gcttcaagac catctttgca
361 gaacacctca gtgatgagtg ccggcgccga ttctacaagg actggcacaa gagcaagaag
421 aaagccttca ccaaggcctg caagaggtgg cgggacacag acgggaaaaa gcagctacag
481 aaggacttcg ccgccatgaa gaagtactgc aaggtcattc gggtcattgt ccacactcag
541 atgaaactgc tgcccttccg gcagaagaag gcccacatca tggagatcca gctgaacggt
601 ggcacggtgg ccgagaaggt ggcctgggcc caggcccggc tggagaagca ggtgcccgtg
661 cacagcgtgt tcagccagag tgaggtcatt gatgtcattg ctgtcaccaa gggtcgaggc
721 gtcaaagggg tcacaagccg ctggcatacc aagaagctgc cgcggaagac ccataagggc
781 ctgcgcaagg tggcctgcat tggcgcctgg caccccgccc gcgtgggctg ctccattgct
841 cgggccgggc agaagggcta tcaccaccgc acggagctca acaagaagat cttccgcatc
901 ggcaggggcc cgcacatgga ggacgggaag ctggtgaaga acaatgcatc caccagctac
961 gacgtgactg ccaagtccat cacaccgctg ggtggcttcc cccactacgg ggaagtgaac
1021 aacgacttcg tcatgctgaa gggttgtatt gctggtacca agaagcgggt cattacgctg
1081 agaaagtccc tcctggtgca tcacagtcgc caagccgtgg agaatattga gctcaagttc
1141 attgacacca cctccaagtt cggccatggc cgcttccaga cagcccaaga gaagagggcc
1201 ttcatgggcc cccaaaagaa gcatctggag aaggaaacgc cggagacctc gggagacttg
1261 taggctgtgt ggggtggatg aaccctgaag cgcaccgcac tgtctgcccc aatgtctaac
1321 aaaggccgga ggcgactctt cctgcgaggt cgcagagtgc tgtgtaaccg cccaaggggt
1381 tcaccttgcc tgctgcctag acaaagccga ttcattaaga caggggaatt gcaatagaga
1441 aagagtaatt cacgcagagc tggctgtgcg ggagaccgga gttttatgtt ttattattac
1501 tcaaatcgat ctctttgagc atttgcggag cagaggtttt tttttttttt tttttgagag
1561 agtcttgatc ttgtcgccca ggctgctgga gtgccgggga gcagagtttt taaggataac
1621 ttggcgggtg gggagagcca gtgagccagg agtgccgatt ggtcagggag gaaatcacag
1681 ggagtcagct gtcttcttgc gctgagtcag ctcctgggtg gtggccacaa gatcagatga
1741 gccagtttat caatctggtt ggtgccagca gatccatcaa gttgcagggt cggcaaaata
1801 tctcaagcac tgatcttagg ggcagcttag ggagggtcag aatcttgtag cctccagatg
1861 cacgactcct aaaccataat tcccaatatt gtggctaatg ttagtcctaa aaatgcaatc
1921 tagtccccag gcaaggaggt ggtctgcttt gggaaagggc tgttactgtc tttgttttaa
1981 actataaact ggctgggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccaa
2041 gatgggcgga tcacctgagg tcgggagttc aagaccagcc tggccaacat cgagaaacct
2101 cgtctctatt aaaaatacaa aattaaaaaa aaaaaaaaaa aa
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