LOCUS BC050368 2329 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens matrix metallopeptidase 19, mRNA (cDNA clone MGC:51823
IMAGE:5761074), complete cds.
ACCESSION BC050368
VERSION BC050368.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46358421.
FEATURES Location/Qualifiers
source 1..2329
/db_xref="H-InvDB:HIT000053423"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51823 IMAGE:5761074"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2329
/gene="MMP19"
/gene_synonym="RASI-1"
/db_xref="GeneID:4327"
/db_xref="HGNC:HGNC:7165"
/db_xref="MIM:601807"
CDS 93..1619
/gene="MMP19"
/gene_synonym="RASI-1"
/codon_start=1
/product="matrix metallopeptidase 19"
/protein_id="AAH50368.1"
/db_xref="GeneID:4327"
/db_xref="HGNC:HGNC:7165"
/db_xref="MIM:601807"
/translation="MNCQQLWLGFLLPMTVSGRVLGLAEVAPVDYLSQYGYLQKPLEG
SNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLEDPFNQKTLKYLLLG
RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHG
RQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHAL
GLGHSRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKSPVIRDEEEEETELPTVP
PVPTEPSPMPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSGPGPLFRVSALWEGLP
GNLDAAVYSPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRVEPNLDAALYWPLNQKV
FLFKGSGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAAMSWQDGRVYFFKGKVYWR
LNQQLRVEKGYPRNISHNWMHCRPRTIDTTPSGGNTTPSGTGITLDTTLSATETTFEY
"
BASE COUNT 627 a 647 c 549 g 506 t
ORIGIN
1 gagcccctct gcctagcact gctcccccaa ggctcccaga aatctcaggt cagaggcacg
61 gacagcctct ggagctctcg tctggtggga ccatgaactg ccagcagctg tggctgggct
121 tcctactccc catgacagtc tcaggccggg tcctggggct tgcagaggtg gcgcccgtgg
181 actacctgtc acaatatggg tacctacaga agcctctaga aggatctaat aacttcaagc
241 cagaagatat caccgaggct ctgagagctt ttcaggaagc atctgaactt ccagtctcag
301 gtcagctgga tgatgccaca agggcccgca tgaggcagcc tcgttgtggc ctagaggatc
361 ccttcaacca gaagaccctt aaatacctgt tgctgggccg ctggagaaag aagcacctga
421 ctttccgcat cttgaacctg ccctccaccc ttccacccca cacagcccgg gcagccctgc
481 gtcaagcctt ccaggactgg agcaatgtgg ctcccttgac cttccaagag gtgcaggctg
541 gtgcggctga catccgcctc tccttccatg gccgccaaag ctcgtactgt tccaatactt
601 ttgatgggcc tgggagagtc ctggcccatg ccgacatccc agagctgggc agtgtgcact
661 tcgacgaaga cgagttctgg actgagggga cctaccgtgg ggtgaacctg cgcatcattg
721 cagcccatga agtgggccat gctctggggc ttgggcactc ccgatattcc caggccctca
781 tggccccagt ctacgagggc taccggcccc actttaagct gcacccagat gatgtggcag
841 ggatccaggc tctctatggc aagaagagtc cagtgataag ggatgaggaa gaagaagaga
901 cagagctgcc cactgtgccc ccagtgccca cagaacccag tcccatgcca gacccttgca
961 gtagtgaact ggatgccatg atgctggggc cccgtgggaa gacctatgct ttcaaggggg
1021 actatgtgtg gactgtatca gattcaggac cgggcccctt gttccgagtg tctgcccttt
1081 gggaggggct ccccggaaac ctggatgctg ctgtctactc gcctcgaaca caatggattc
1141 acttctttaa gggagacaag gtgtggcgct acattaattt caagatgtct cctggcttcc
1201 ccaagaagct gaatagggta gaacctaacc tggatgcagc tctctattgg cctctcaacc
1261 aaaaggtgtt cctctttaag ggctccgggt actggcagtg ggacgagcta gcccgaactg
1321 acttcagcag ctaccccaaa ccaatcaagg gtttgtttac gggagtgcca aaccagccct
1381 cggctgctat gagttggcaa gatggccgag tctacttctt caagggcaaa gtctactggc
1441 gcctcaacca gcagcttcga gtagagaaag gctatcccag aaatatttcc cacaactgga
1501 tgcactgtcg tccccggact atagacacta ccccatcagg tgggaatacc actccctcag
1561 gtacgggcat aaccttggat accactctct cagccacaga aaccacgttt gaatactgac
1621 tgctcaccca cagacacaat cttggacatt aacccctgag gctccaccac ccaccctttc
1681 atttcccccc cagaagccta aggcctaata gctgaatgaa atacctgtct gctcagtaga
1741 accttgcagg tgctgtagca ggcgcaagac cgtagatctc aggcctctaa cacttccaac
1801 tccagccacc actttcctgt gcattttcac tcctgagaag tgctccccta actcagatcc
1861 cctaacttag atttggcccc caactccatt tcctgtctgt cttagacagc ccttccaact
1921 gtgtcatctc ttctctggag gtcaatggtg gagggagatg cctgggtcct gttcttccta
1981 cataaaatgc aagaaaacag catggccagt aaactgagca agggccttgg aatccttgag
2041 aatcacattt atgtgcttat gattacgggc aagctaatta accttgttga atctcagatt
2101 ccccatttgc aacattaggt taagaccagt actgcaggat tgttgcacta aatgaaatac
2161 tgtatgtgaa gtgcctggca cagtgtctgg tacatttgtg tttaataaaa gctaactcca
2221 tgttcataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//