LOCUS BC050360 1799 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 25, mRNA (cDNA
clone MGC:51751 IMAGE:5742404), complete cds.
ACCESSION BC050360
VERSION BC050360.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1799)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1799)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21327696.
FEATURES Location/Qualifiers
source 1..1799
/db_xref="H-InvDB:HIT000053422"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51751 IMAGE:5742404"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1799
/gene="DDX25"
/gene_synonym="GRTH"
/db_xref="GeneID:29118"
/db_xref="HGNC:HGNC:18698"
/db_xref="MIM:607663"
CDS 365..1474
/gene="DDX25"
/gene_synonym="GRTH"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
/protein_id="AAH50360.2"
/db_xref="GeneID:29118"
/db_xref="HGNC:HGNC:18698"
/db_xref="MIM:607663"
/translation="MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML
SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK
QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQ
MLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNI
YGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEK
VLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI
EVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY"
BASE COUNT 599 a 343 c 418 g 439 t
ORIGIN
1 ggcgggagca gcaatcgcag ccatggcgtc gttactgtgg ggaggcgacg caggggcggc
61 ggagagcgag cggctgaaca gccacttttc aaacctcagc caaccccgga agaacctttg
121 gggtattaag agtactgcag tccgaaacat agatggttct attaataaca tcaatgaaga
181 tgatgaagaa gatgtagtgg atttggcagc taattcactc ttaaacaagt taatccatca
241 atccttagta gaatccagtc accgtgtgga agttttacag aaggatccca gctctccact
301 ttactcagta aagacatttg aagagctgcg gctaaaggaa gagttactaa aaggaatcta
361 tgcaatggga tttaataggc catctaaaat ccaagagatg gctctcccta tgatgctggc
421 acatccaccc cagaacctca tagcacagag ccagtctgga acaggaaaga cagcggcatt
481 tgtgttggca atgttaagca gagttaatgc cttggaattg ttcccacagt gcctctgcct
541 agctcctact tatgaattgg ctctgcaaac tggccgtgtg gttgagcaga tgggaaaatt
601 ctgtgtggat gttcaagtga tgtatgccat tcgagggaat cgaattccca gaggcaccga
661 catcactaaa cagattataa ttggcactcc tgggactgtc ctagattggt gttttaaact
721 aaaattgatt gatttgacta agattcgtgt gtttgtcctg gatgaagcag atgtgatgat
781 tgacactcaa ggattctcag atcatagtat tcgtattcaa agagctctac cctccgaatg
841 ccaaatgctc ctcttttcag caacctttga ggactctgtg tggcactttg ctgagcgaat
901 catccctgac cctaatgtta tcaagttacg caaagaggag ctcacactga acaacatccg
961 gcaatattac gtgctgtgtg agcacaggaa agacaaatac caagctctgt gcaacattta
1021 tggcagcatc accattggtc aggccatcat cttctgccag actcgtcgaa acgctaagtg
1081 gttgaccgtg gagatgatac aggatggcca ccaggtgtct ttgttaagcg gggagctgac
1141 cgtggagcag cgagcttcca tcattcagag gtttcgggat gggaaagaga aggttctcat
1201 aacaactaat gtttgcgccc gagggattga tgtgaagcag gtcacaattg ttgtgaactt
1261 tgatctccct gtaaaacaag gagaggagcc ggactatgag acctacctcc accgcatagg
1321 gcggacgggg cgctttggga aaaaaggcct tgccttcaac atgattgaag tagatgagct
1381 gccctcgctc atgaaaatcc aggaccactt taacagcagt attaagcaac tcaacgctga
1441 agacatggat gaaattgaaa agattgacta ttgaagaaag aactttattg tttgtgcagt
1501 atcctagttt atgtgagaat gtctcagtgg gttttgaagg taattttttt atgttgaggc
1561 tttttcgacg tgaaactgtc acagatggca aaataaatgt cacggtactt agttttaaga
1621 catgaggtct ttttgaagcc aaattgatgt gaagcttgtg atccttttga ataaaaaaaa
1681 ggcaagatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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