LOCUS BC050324 4692 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 17, mRNA (cDNA clone
MGC:48450 IMAGE:5266097), complete cds.
ACCESSION BC050324
VERSION BC050324.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4692)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4692)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29244580.
FEATURES Location/Qualifiers
source 1..4692
/db_xref="H-InvDB:HIT000053409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48450 IMAGE:5266097"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4692
/gene="ZDHHC17"
/gene_synonym="HIP14"
/gene_synonym="HIP3"
/gene_synonym="HSPC294"
/gene_synonym="HYPH"
/gene_synonym="KIAA0946"
/db_xref="GeneID:23390"
/db_xref="HGNC:HGNC:18412"
/db_xref="MIM:607799"
CDS 123..2021
/gene="ZDHHC17"
/gene_synonym="HIP14"
/gene_synonym="HIP3"
/gene_synonym="HSPC294"
/gene_synonym="HYPH"
/gene_synonym="KIAA0946"
/codon_start=1
/product="zinc finger, DHHC-type containing 17"
/protein_id="AAH50324.1"
/db_xref="GeneID:23390"
/db_xref="HGNC:HGNC:18412"
/db_xref="MIM:607799"
/translation="MQREEGFNTKMADGPDEYDTEAGCVPLLHPEEIKPQSHYNHGYG
EPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNR
IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC
IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVN
LGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINH
LQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLM
YGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFL
ANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRS
KHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHC
ETTYTKDGFWTYITQIATCSPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNER
MNARRYKHFKVTTTSIESPFNHGCVRNIIDFFEFRCCGLFRPVIVDWTRQYTIEYDQI
SGSGYQLV"
BASE COUNT 1429 a 784 c 979 g 1500 t
ORIGIN
1 gtcatggggg caggagaaga aggaggagga ggcccgcgtc gcctccggcg gggctcgcgc
61 tcgccccgcg ctcgccctcc gcctcgcccg agccccggga gggtgaaacg ctttctccca
121 gcatgcagcg ggaggaggga tttaacacca agatggcgga cggcccggat gagtacgata
181 ccgaagcggg ctgtgtgccc cttctccacc cagaggaaat caaaccccaa agccattata
241 accatggata tggtgaacct cttggacgga aaactcatat tgatgattac agcacatggg
301 acatagtcaa ggctacacaa tatggaatat atgaacgctg tcgagaattg gtggaagcag
361 gttatgatgt acggcaaccg gacaaagaaa atgttaccct cctccattgg gctgccatca
421 ataacagaat agatttagtc aaatactata tttcgaaagg tgctattgtg gatcaacttg
481 gaggggacct gaattcaact ccattgcact gggccacaag acaaggccat ctatccatgg
541 ttgtgcaact aatgaaatat ggtgcagatc cttcattaat tgatggagaa ggatgtagct
601 gtattcatct ggctgctcag ttcggacata cctcaattgt tgcttatctc atagcaaaag
661 gacaggatgt agatatgatg gatcagaatg gaatgacgcc tttaatgtgg gcagcatata
721 gaacacatag tgtggatcca actagattgc ttttaacatt caatgtttca gttaaccttg
781 gtgacaagta tcacaaaaac actgctctgc attgggcagt gctagcaggg aataccacag
841 tcattagcct tcttctggaa gctggagcta atgttgatgc ccagaatatc aagggcgaat
901 cagcgcttga tttggcaaaa cagagaaaaa atgtgtggat gatcaaccac ttacaagagg
961 caaggcaagc aaaaggatat gacaatccgt ccttccttag aaagctgaaa gctgataagg
1021 aatttcggca gaaagtaatg ttaggaactc ctttcctagt tatttggctg gttgggttta
1081 tagcagacct aaatattgat tcttggctca ttaaagggct aatgtatggt ggtgtttggg
1141 ctacagtaca gtttctttca aaatcctttt tcgatcattc aatgcatagt gcattgcccc
1201 ttgggatata tttggcaacc aaattctgga tgtatgtgac gtggttcttc tggttttgga
1261 atgatctcaa ctttttattt atccatcttc cattccttgc caatagtgtt gcacttttct
1321 acaattttgg aaaatcttgg aaatcagatc cagggattat taaagcaaca gaagagcaaa
1381 agaaaaagac aatagttgaa cttgcagaga caggaagtct ggacctcagt atattctgca
1441 gtacctgttt gatacgaaaa ccggtgaggt ccaaacattg tggtgtgtgc aaccgctgta
1501 tagcaaaatt tgatcatcat tgcccatggg tgggtaactg tgtaggtgca ggcaaccata
1561 gatattttat gggctaccta ttcttcttgc tttttatgat ctgctggatg atttatggtt
1621 gtatatctta ctggggactc cactgtgaga ccacttacac caaggatgga ttttggacat
1681 acattactca gattgccacg tgttcacctt ggatgttttg gatgttcctg aacagtgttt
1741 tccacttcat gtgggtggct gtattactca tgtgtcagat gtaccagata tcatgtttag
1801 gtattactac aaatgaaaga atgaatgcca ggagatacaa gcactttaaa gtcacaacaa
1861 cgtctattga aagcccattc aaccatggat gtgtaagaaa tattatagac ttctttgaat
1921 ttcgatgctg tggcctcttt cgtcctgtta tcgtggactg gaccaggcag tatacaatag
1981 aatatgacca aatatcagga tctgggtacc agctggtgta gcgacatctt atcctatgaa
2041 gcatattgct gagtggtgcc tgaaaattgt gtctgtccgt gtctttctca cactcgaatc
2101 cacatccttt gaacaagagc atgctatgtg tagggctaat ggtgaatttt acagtctttt
2161 tttcaacact tttattaaca aaagtaaaca tggacagaac acactgccat ttctgggaag
2221 agtaaagatg ataaaaaata attttaatgg ttcttaatgt ggaaattcac aacatactca
2281 acttttgggt tttgttctca cagtattttt cacaaaaaaa gggtaaactt attctattga
2341 cagacatggt gtactgatca gaaatgttca gttttaacta aaactaaatt tatgttattt
2401 ggctaaatgt tatgatgcag tctagtacga gtattgcatc taattccagg agcattgttt
2461 taagttgatt gactagttat tatgtacatt tcagaatgta cacataaata ctgtgatgaa
2521 aatcatgtga ttgggatcta ctgtgatgtt gtcttcaaag gcaggagaaa ataatgttca
2581 caataaaatg tgctaacaat gttttgtttc tatcagctgt tgcaatgctg atatatttct
2641 agttcagtga aataatttgt agtaacctta ctctgaggtt ttacggtctg ataatgaagc
2701 acttgcatga gtatagtaag tcatgttttt ttgttcaaat ttaaaagccc tgctaattgc
2761 atgacacacc acatagaatg tatactagca gatactatcc agtgaagcat aaattagaat
2821 ttaatttgat gttcaaaaac agttccattt ttaagggtta aggtggtatt ttcaagaaaa
2881 ggcagaacaa ataatgcaaa attctcagta atagtgatac atggatatac ttccttttaa
2941 attctcagct gcaaaataat tgtagacaaa ataatggcat ttaactaaag atggagcatg
3001 atctaagtac atagcacatg tgaataaaag aaaagctgac agtatattct ggtttcaata
3061 aaatgaccta tcagaaagta gaatttcatc cccaagagta tttcagttta tccaatatta
3121 agtaagttct gaaacagttt tagaaaaaat tttctttttg ttaaatgtga tgcactggtc
3181 aatttttgtc acagcatttt cataccttca tggtggacta ctagtcactg cttccataaa
3241 tattgtttac agggtgagat ttggtttatt catcttaagt gctgtagcaa actgtggttc
3301 gagcaacctg tgggaaatct gtgagaggga atggggtggg agatgtgggg gaatggtggt
3361 cagactgatg acagatccta gaccaatgta aagaatgtgt atctgtatat aaataattta
3421 tcaaatagtt ttctctttgt gtctgtgtta gtgtttttaa agctgctcat ttcattttgt
3481 ccaaccaaaa agaaaaggga gataactaat gagcttctag tgatgttcaa aattgctgtt
3541 aataggcatt ataccctgca agttcactgc atgtctgatg cttggtaaaa ctagtcttcc
3601 ctgtaaaatg cagattacag gtattaaagc aatctagtgg tatacccgcc ccttgcctta
3661 gtaagaggag cagtgaaatg tatatagttg atgttcagta tttccaagta ccatttttat
3721 atagtagctt atttggccat aagtcacaca tcaaaaaaag attaccctta gtgtatgtgt
3781 tttaatatta gaaaattggc atatgtactt tatttttgaa aagggaagag atgggtgtgg
3841 ggtggcaata gcattgtgcc attttgtcat agaatgtaaa aattggttaa ctttacaaat
3901 gtcagctagt tttgactact aattggggga aattttagat aatttttaaa ttcaaagtta
3961 tttataaaat gctagaattt gttttaattt tttgtatttt gagccacttc acatgaagac
4021 tcagttgcat ttttatcgaa tacattttta tcaacagtta aagactatgg tggttttttc
4081 agagtttggc taagaatgtt gttaccatct tctttgtttg tggtacaata ttttcagtgc
4141 aaaagagatg tcattcagtt aaaaagacaa acctctagat gtgtaattac atggaaaata
4201 ctagcaatgt gaatgctttt gtagtaacca tcttgtagta cctgtgaaat ctataactca
4261 gaaatggtca gatggtcagg agccagctat gcagcagtat accatctgtt taattatttt
4321 gtaggtcctg tgtgtggaac caactataaa cccagttcta aagttgtgta tgatggtgaa
4381 cctttgggaa tagttcttat caacttaatt ggatactttt agcaaatagg aacttaattc
4441 tcagcactga acatgaatta cttccttgga gttttttttc attcatattt ttgttgtttc
4501 caggaattta tttgatatta atgggcgtaa aacagcatca ttgtacttaa gctatggatg
4561 tttttatttt atattttctt tatttataac tgtgccaagt attattttgc tacttaccgt
4621 gttattctgt ggaaagaaaa acctgtaaag tgtttaataa attagccctc cttacacaaa
4681 aaaaaaaaaa aa
//