LOCUS BC050319 3792 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 88, mRNA (cDNA clone
MGC:48420 IMAGE:4837146), complete cds.
ACCESSION BC050319
VERSION BC050319.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3792)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3792)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: k Column: 4.
FEATURES Location/Qualifiers
source 1..3792
/db_xref="H-InvDB:HIT000099155"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48420 IMAGE:4837146"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3792
/gene="C1orf88"
/db_xref="GeneID:128344"
CDS 58..510
/gene="C1orf88"
/codon_start=1
/product="C1orf88 protein"
/protein_id="AAH50319.1"
/db_xref="GeneID:128344"
/translation="MCFSRADAADNYPFGTCQQRKLFPHFHPPNLIGNKFVPLRGSPH
RGPGCYFSDGYGLAYDLSKIPTSIKGYTLGARTAVRFKPIQKEMTPHAGRYQKVSPQQ
EKHKQNFAPFNVLVPRFKDYPKDTYYPRYVSSLLVHFNKKSNRRKRST"
BASE COUNT 1157 a 760 c 821 g 1054 t
ORIGIN
1 agtggccttc gtttccttgg caacgcagta cacaagtgct agccctagca gctcgcgatg
61 tgcttcagca gagcagacgc tgcggataac tacccttttg gaacatgtca acagaggaaa
121 ctttttcctc acttccatcc cccgaatttg attgggaaca agtttgtccc tcttagggga
181 tcaccccaca gagggcctgg gtgttatttt tcagatggat atggcttggc atacgactta
241 tctaagatcc caaccagtat aaaaggatat actttgggag ccagaacagc tgtgaggttt
301 aagccaatac agaaggaaat gacacctcat gcaggcaggt accagaaagt aagtcctcag
361 caggaaaaac acaaacaaaa ttttgctcca tttaatgtct tggtgcctcg atttaaggac
421 tacccaaagg acacttacta tcccaggtat gtctcctccc ttttggtgca cttcaacaaa
481 aaaagcaata ggaggaaaag aagtacgtaa taaaagaagc acataaagaa gggatgacat
541 ccaaaccatc gcagttaaat aaggaaccat tcagagattt aatcaattgt ctcacagatt
601 tctggcattg tagaatgtag aatcatagtt actcattcaa tgaattttta ttaacatgcc
661 aggtagtttt gtaggttcga tagatttttg cactaaatcc atcacacaag gctcctgatt
721 tcttggggct tacattctag agtccagaca gagcacaggc aaatacacaa gaaaatatca
781 atagtgatag agtgaccata taatttgtta gtcaaacgat gacacttctg agagtaaaag
841 ggggcctatt aataattcta ccaagacagt acccataagg tagggactgt catggacaaa
901 ccaggaagta ggttgtccag gctacaaaga aggtaaaaca ggatgacaat gtgataggga
961 gtgatggcct ggagtctact ttagaaaggg ttgaataaat gacagttaac ctgagatcta
1021 aatgacaaga ctgagccagc cctgtgaaga tctggggacc gagcattccc agcagaagga
1081 acagcaagtg caaaggctat aaattgggaa ggaatttgac gtgaacaaaa aggcatgctg
1141 ccatggctag agtgtagtga gcaagtagga aatgagacag aaatggaggg catgctggag
1201 cacataggcc ttgcaggcca acaggcttat tctcaatgct ttaggaagct attcagaatg
1261 tatagacttg tagggcaaaa gatcaaggac tttcttttat tgatgagaaa tccaaggatc
1321 acagagtgat gtaactttct caagttgcat taaggaagta gaagcattga gtcttgaccc
1381 ccaagtccag tccattattt cctgacagta aagagtccac accaaaagac aaagtgtata
1441 tgaacaaaga caatttttaa atgaccccat tgtcaagaaa atttaactgg ctttgctttg
1501 ctttgctttg cctacattgc agatagatta tcactgcact tttatcacca actttaaatt
1561 gtgggcagta ctaattcatc actgctttag atctctttca tcacccaccg cttctaggac
1621 cttctcatct ctcagctata gatactgagg tacagaaata tcttttaatc tggagtcgat
1681 ctgtgctcta actggatgtc aagattgtca agttagatgt ttaacgctaa catctaactc
1741 gaaatacatt aacaggtaaa ggaatcccat gcttaattaa aaagctaatc aatctgttgc
1801 ctttttccaa gaggttaggc ctagtccagg gacggctctg gtactgatgg agtttgtgta
1861 tgatcactaa ctcattagac atgatgcttg tatttttatt tctagccctg gtgcatacaa
1921 cccagagaag aagccaccgc caaaaattgc ctggccaatg aaatttggat ctccagactg
1981 ggctcaggtt ccatgtctac agaaaagaac cctaaaagct gagctgtcca cagacaaaga
2041 ctttagaaag catcggaacc gtgtggccta cctaaacctg tattataatt gagcggctgt
2101 aactaccttc acgtgctcct cttatacaca gactctccag gactgaggac agagctgctc
2161 ttcttcttct acgttactgt ggccctcttg tctggcagcc tggagcccag ggagggacag
2221 gggcttatag ctgctgtatg agaacataaa gactagtgca cagtgctatc tccatctact
2281 gacttgtggt gtacacgtgc atgtctgggt ctgtgggttt ctgttgggtg ctgagttggg
2341 tgatttcatt ttagtgaaat atttgtgggc ccctgctctc tagttctaat tcccaggagc
2401 caattttata tattctacca ctagccctgg tcataggagg ctgttagcct atacatgtca
2461 agggtttgga tgggatttgg gcttgctaga tacagaaaac acttaaggca gattaaaaca
2521 tgtattggag ctctcccaat tgtgttgctc agtgtggagt gggaaggtct tgatttggtt
2581 gactttccca gattgacata aaactcaaaa accaaaaaat tgcccctttc ctatgacatc
2641 atccatttag tctgtgagtc aacatatata ctgaggtcct actatgtgtt gagcagagca
2701 gtaagcactg gggatatggc aggaatcaaa ataaacttat ctactaagtc cttgggcctg
2761 gcctgaagtc agaggaggac tccccagggc agctagggga ttgggtctgc cctccaatct
2821 gaatgacccc ctagaacctt acaagtcatt ctggggttat aaagatcata acatttatag
2881 ccccagactg acttgtaagc agctgcattt aaagtactta ctcagacact caggcctgag
2941 agatagaccc ctttctttcc agcactagct gaaataatca agtatatagt ttgttcagga
3001 ttggcactaa atgtgattta atcttttaat aaaagggtcc ttttgtaccc acttaggctt
3061 cttcgtaatt accagaaagg tgataagcct gcatgtgtct ggacaccaaa gattgagaag
3121 ctgccagtgg ctgcaagaga gcctactgta accctcatgg ccaccccctg atgagtgtta
3181 cctggggaaa gggctagcaa gaggtgaagc ctcctggtca tatgatgctg ggggtgccta
3241 attccttaaa ggccaaggtc ttctgaaata ataatggtga aggacagaaa agtctttatg
3301 agaaatcaca taggatatat taagataatg ataaagatac ctcagcaaga acatacctaa
3361 tatatacact tcttttaatc tgatgactta atgatttctg ttatcaagaa gtatttatga
3421 cttgagataa gtcaggatta actgttatca cctctcctgt acacctccct cctttttctc
3481 ctttgtaccc acatgtgcag attttttcag aggtgacaat ttagcattta atgttttttt
3541 ttctgcttca agttcttagg tccctttgga ggatattgat gggggtggag gtggggatag
3601 aacatctttc acactgtttg gtacagagat gctcaaagct tttcccaggg aaaggaactc
3661 tctaaaatag taatctgatt tgatgaaaga taaaatttta atatagcttc agttaacctt
3721 caggatactt taaatgctac attgtatata aaagtaataa agtacaaatg aacacgaaaa
3781 aaaaaaaaaa aa
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