LOCUS       BC050289                4158 bp    mRNA    linear   HTC 09-SEP-2005
DEFINITION  Homo sapiens sorting nexin 13, mRNA (cDNA clone IMAGE:5271192),
            with apparent retained intron.
ACCESSION   BC050289
VERSION     BC050289.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4158)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4158)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 74 Row: m Column: 20
            This clone has the following problem: retained intron.
FEATURES             Location/Qualifiers
     source          1..4158
                     /db_xref="H-InvDB:HIT000099133"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5271192"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
BASE COUNT         1388 a          702 c          774 g         1294 t
ORIGIN      
        1 tcagtggagg tagcaacagg gttgcttgtg tcacccctct cccagctcca cacaactcag
       61 cagagagact gactctgttt gggagaatgt aagggaagaa agcaagagtt tctgcctggt
      121 aatttagata attcttccac atcttattta ggaccataaa ggcaatacca ctacaagtct
      181 ttcagagcca caacattagt aggcttaggg tgcctctaat gtatatatgg ctacagttac
      241 tagaaacata gatcacaaca cccaagttcc tttgaatacc tggaaagcct tcccaagaag
      301 gactgggaca aacaagccca gactgtaaag actgcaataa atgcctaact cttcaatgtc
      361 cagacatcag tgaacatcca caagcatcaa gaccattcag gaaaacattg gcctcaccaa
      421 atggactaaa taagacacca cagaccaatc ctggagacag agatatgtgt ccttttgggt
      481 ggaaaaatca gaatagttgt tttgaggaag tacaacaaaa ttcaagataa tacagagaag
      541 gaattcagaa tcttatcaga taaatttaac aaagagatta aaataataaa tagaatcaag
      601 cacaaatctt ggagttgaaa aatgcagttg acctactgac gaatgcatca gaatttctta
      661 acagaattga tcaagcagaa gaaggaatga gtgaacttga agacaggcta attgaaaata
      721 cacagaggag aaaaaagaat aaaaaggaat gaggcacaac tacaagatct agaaaatagc
      781 ctcaaaaggg caaatttaag agttattgtc cttaaagagg aggtagagag agagttaggc
      841 gtagaaaatt tattcagata gataataaca gagagcctct caaacctagt aaaagatatc
      901 aatattaaaa tacaagaagg ttatagaaca ctgagcagat ttaacccaag actacctcaa
      961 gatacttaat aatcaaactc tcaaaggtca aggatgaaga aaggatccta aaagcagcaa
     1021 gagaaaaaga aaaaaacatg gaatggtgct ccagtacatt tgccagcaga cttctcagtg
     1081 gaagttgtac aggccaggag agagtggcat gccatatttt agtgtggatt aggaacttca
     1141 gcaaagtatt atcagaggaa ctgagtgtct ctgtacttta ttctaaataa ctatgtccta
     1201 cttacccgct cttagaagga agtcagagga cacttctgta ggtgaaatag tattcccccc
     1261 tgattcagag agaagagagc atggaggcag agcagaaact tcgttagcag gcattctgtc
     1321 ctttggttaa aagataaaag tggccaagat gtggaaaaag gataataaaa cacaaaggaa
     1381 taagagttgt ataactctga gggacgtaaa agaagttata ttgggagcta gtttcaagat
     1441 gaaatactaa ttctaagcca gtctatccat atggggatgg ggaagccttg gcattgtcct
     1501 ttttctgata acctttggac cctttgtaat attttatttg acattttata tcctctgctt
     1561 tgtgggtggg ggtttagtgg ttactctcct gtttggaaaa acaaactcag agaagtacct
     1621 agaacagtgt gaacactcat ttcttcctcc aacatcacct ggggttccta agtgcttaga
     1681 agaaatgaaa cgggaagcca ggactattaa gattgataga agattgacgg gtgccaatat
     1741 aattgatgaa cctctccagc aagttatcca gttttccttg agggattatg tccagtattg
     1801 gtattataca ctaagcgatg atgaatcttt tcttcttgaa attaggcaga ctcttcaaaa
     1861 cgcactcatt cagtttgcta ctaggtaagg acacgacatt gtatttatgc agaaaaattt
     1921 agatgtatgg tttgtaccag taaggaaaac aacttttaag gggaggaatt gtttattaaa
     1981 aggtaagtag aacagcagat tattactgtg ggataactcc aagattttac aactagagct
     2041 cttaaaacct ttaaattacc ccagatttta ggtttttaca gaatgttatt ttgattaagc
     2101 cctgctttct aagtctgttt ggtagttttt tctttagggt ccaaatcagg tgacttttca
     2161 aatctgttac cccacttatt gctacttccc ccctccccct tccctagacc ctctatttta
     2221 tgtgagtgct atgaaaatag attagtttca gtgtaactgc tcttctccac atagttttgc
     2281 tgtaaccctt ctcctaatta tgacacatat ctattggaag tcctcttgga cgagaaggga
     2341 ccaaaggaac ataagtcagt ggaaaatatt caagtttata tttttcagaa aagaagtata
     2401 ttttggtgag tttgttttaa caaacttttt ttgtcagata tactaaaatt cttactttac
     2461 aaaccagcta tatactgctt cccatatgat gaaagtgttt tgacttctat tcttgtactt
     2521 aaactgcttg attttttttg atgggaggct atttcacacc tgtttaaatt atgtttactt
     2581 tcatttttat ttttgaaggc tttttttccc ctccatcctt gatgtctaac tttttgaaag
     2641 ccttttaatg ggcaacgtta tgtgaaaggg aatacttgtg ttctagaaat tatttatttt
     2701 tgaaagaaag attttatgtt tggatgagtt tgtagatttt ttttttttta ttccattaaa
     2761 atatgttgct accatcacac gcaaagattg ccctgctagg tatttccagc catgctgccc
     2821 tctcaggcgc tttcctctat ctccattgat tataaagctt tagatttgga gttggctaga
     2881 ggaagggcat tggatgtgtt tcccaacctc attggggagc ctggcacaag ttttatgatt
     2941 tgaacaataa ttgttacaga gatagatttg tactcctcat ccctcgtgat taggagcaag
     3001 aatttacaaa gtagccagcc agaattacag atgcagactc actgtggaac acagaacata
     3061 taattggtat aatcaaagaa agtcagaatt tgaatttaat ctcttttatt tcatatgcac
     3121 cattattgag tgttaggtat tctttcagat aactcttcta aatatttttt attgctttct
     3181 atagcaacac tatcctgatg actttttttt tctttgaaag ggtgagaata ggaagaattc
     3241 attattcttg tgcctgacta ttgaaaaata tataaaaatg tgtaacacat tttagacctg
     3301 ggaagagatt tgaactagta atctgaaaac ttgagtttgc attctagctc cacctctagc
     3361 tatgggactg tgagcaagtg tctttaaact ctgaaccttg gtttttctca tatgtaaaat
     3421 aagtgtaata ataactgccc tgttctgtgt tcctctcagg ataattgtca ggatcaaaat
     3481 tcatcttatt caactaatat tttgggcata ctttgtacca accagatgct ggggatacag
     3541 cagtgaataa aacaaagtcc ctgctcagtg gagtgaaatg aaatacctgt gacagtgttt
     3601 tgaaaattgt gaaggaattt agaaatttaa gtttttatgc catccaacac ccataatttt
     3661 actgatgagg aagctaaggt ccagaaaggt aaagtggtta gtctaatgtt atctagtgag
     3721 ttagaatcaa attgttctta agtttggtat tttttctcct acccaattaa atattttata
     3781 atctaggtta tttatcttag tttcctgctc ttctttcctg ttattgcaat actttccctg
     3841 tttttgatcc cctagtcacc tttcttttca ctgtaggtat taagtttttt tttcttttga
     3901 aaacattcag tgctatcaag cttagtgaaa aagcaaggtt ttttccatcc tacactgatc
     3961 taaatttata tctttgcttg accatttacc ttaaatttct ggaaaattaa aacaatacag
     4021 ataataacta ctttagaggc tgctttgagg ctaaaaaatg gtatcaaata aagttcttag
     4081 cgtgcagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     4141 aaaaaaaaaa aaaaaaaa
//