LOCUS BC050288 2479 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 8, mRNA
(cDNA clone MGC:43650 IMAGE:5270636), complete cds.
ACCESSION BC050288
VERSION BC050288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46094077.
FEATURES Location/Qualifiers
source 1..2479
/db_xref="H-InvDB:HIT000259098"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43650 IMAGE:5270636"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2479
/gene="DNAJB8"
/gene_synonym="MGC33884"
/db_xref="GeneID:165721"
/db_xref="HGNC:HGNC:23699"
CDS 1662..2360
/gene="DNAJB8"
/gene_synonym="MGC33884"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily B, member 8"
/protein_id="AAH50288.1"
/db_xref="GeneID:165721"
/db_xref="HGNC:HGNC:23699"
/translation="MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEK
KFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFRE
FFGGLDPFSFEFWDSPFNSDRGGRGHGLRGAFSAGFGEFPAFMEAFSSFNMLGCSGGS
HTTFSSTSFGGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSV
TVNGKEQLKWMDSK"
BASE COUNT 527 a 829 c 629 g 494 t
ORIGIN
1 acaccgcctt tgccatcacc accgtcattg ccccctctac taccaccacc atcaccacca
61 ccgggtctgc ctcagccaga cccaccactg cctctaatta gactgccacc atcatcactg
121 ccaccaccac tgcccctcca atgccttcct gatgtcacca tctgctttct ctctgctatc
181 ctcacaccca actccatcac aaccaccacc ttcatctgag ccgccatcac cctcacagta
241 cacagccctc aaatgtgtac caaggaggag gacatttact acacgctgca ccctgaacag
301 tctgggacca gcggtcaggg aacaaggaat cgagatgctc acctgcagct cccaggtgag
361 cggctctcta gagcttgcct gggagctgct gaggagctca cggtattcca ggaagctccc
421 catccatgcc tcagcctgtg gctcagaagc agggtcttcg cagaagattg ccccgagctg
481 ttgcaaagct caccattgtc acctgcctgc aacggcctct cttttccact ctccaaatcc
541 cttgtattgg caggctctag tctggaatta taccggtgat gggattctgg aaaatccctc
601 agatttctcc aggatgcaag gagaccatgg aagaggaaca agcctgcaag ggacagcagg
661 tgctaactgc taaccgagac atagtgacaa aaatccagcc acagagataa agaatcaggt
721 tcatctgtag ctacatccag tggagaagtt ctgctcttca actcctctgc taagccacat
781 gtgtcagcag gtgtagaatt gagtggaaca cttctttgga tttgctgtcc gctgcagcct
841 tggccctggt ttcacatccc ctccctcact gactcgctgt gtgaccttga gcactgtgtg
901 tctctgagcc tggttcatcc aagagtttac cgacggccct cgtgtgccag ccactgtcct
961 agacagggac agactttccc gcctttgtgg agcttacccc ggaagacctg gccagataat
1021 gggcacaaaa aaagcaggct cttgtcccca ccccagcctg cctgaacccc accttggcct
1081 cctcttgcct cagctgctgc ccagccatcg gccgagtgga catacccagg acgcccttgc
1141 ccgcctcccc caccacggcc acagaccttt gtcactcacc aaggctggaa tcccgtggct
1201 gatcctgcct ctgccctttg gctcccggga ctcagcccac accacctggg tcacagagca
1261 tcccattccc acacaccgtt gtggccacct caccagcagg ggcaggccca tatgcccagg
1321 tttgcctggt gaggagctgg gggcgggggt atgccccgcc ccgggagctg acgtcataaa
1381 aggagctctg gagggcagcc cactctggcc tggccccaca gcggcagtgt ccctcccctc
1441 cccccactcc tctcagtggg ggcccctcca gtccctgaga attggtacta cgaaaaggtg
1501 aactcctggg cagaatcttg cctagagctt gcggagtcca gccaggcccc tgctgaaggg
1561 ccccagacca ccggccactt ctcccccgtc catctgacca gctgggcccc tgcgcccacc
1621 tggcctccac gttccctctc ctctcaccca cacccctggc catggctaac tactacgaag
1681 tgctgggcgt gcaggccagc gcttccccgg aggacatcaa gaaagcctac cgcaagctgg
1741 cccttcgttg gcaccccgac aagaaccctg acaataagga ggaggcggag aagaagttca
1801 agctggtgtc tgaggcctat gaggttctgt ctgactccaa gaaacgctcc ctgtatgacc
1861 gtgctggctg tgacagctgg cgggctggtg gcggggccag cacgccctac cacagcccct
1921 tcgacaccgg ctacaccttc cgtaaccctg aggacatctt ccgggagttt ttcggtggcc
1981 tggacccttt ctcctttgag ttctgggata gcccattcaa tagtgaccgt ggtggccggg
2041 gccatggcct gaggggggcc ttctcggcag gctttggaga atttccggcc ttcatggagg
2101 ccttctcatc cttcaacatg ctgggctgca gcgggggcag ccacaccacc ttctcatcca
2161 cctccttcgg gggctccagt tctggcagct cggggttcaa gtcggtgatg tcgtccaccg
2221 agatgatcaa tggccacaag gtcaccacca agcgcatcgt ggagaacggg caggagcgcg
2281 tggaggtgga ggaagacggg cagctcaagt cggtgactgt gaacggcaag gagcagctca
2341 aatggatgga cagcaagtag gcgctggcca cccggccctg ccttcccacc accaccaccg
2401 tgcatggggc agcaaacacg tggggccgca gacatagcct gatggttaat aaatgtgcca
2461 agtgaaaaaa aaaaaaaaa
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