LOCUS BC050072 2769 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens forkhead box G1, mRNA (cDNA clone MGC:48322
IMAGE:5284335), complete cds.
ACCESSION BC050072
VERSION BC050072.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: g Column: 6.
FEATURES Location/Qualifiers
source 1..2769
/db_xref="H-InvDB:HIT000053392"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48322 IMAGE:5284335"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2769
/gene="FOXG1"
/gene_synonym="BF1"
/gene_synonym="BF2"
/gene_synonym="FHKL3"
/gene_synonym="HBF-1"
/gene_synonym="HBF-2"
/gene_synonym="HBF-3"
/gene_synonym="HBF-G2"
/gene_synonym="HBF2"
/gene_synonym="HFK1"
/gene_synonym="HFK2"
/gene_synonym="HFK3"
/gene_synonym="KHL2"
/gene_synonym="QIN"
/db_xref="GeneID:2290"
/db_xref="HGNC:HGNC:3811"
/db_xref="MIM:164874"
CDS 370..1839
/gene="FOXG1"
/gene_synonym="BF1"
/gene_synonym="BF2"
/gene_synonym="FHKL3"
/gene_synonym="HBF-1"
/gene_synonym="HBF-2"
/gene_synonym="HBF-3"
/gene_synonym="HBF-G2"
/gene_synonym="HBF2"
/gene_synonym="HFK1"
/gene_synonym="HFK2"
/gene_synonym="HFK3"
/gene_synonym="KHL2"
/gene_synonym="QIN"
/codon_start=1
/product="forkhead box G1"
/protein_id="AAH50072.1"
/db_xref="GeneID:2290"
/db_xref="HGNC:HGNC:3811"
/db_xref="MIM:164874"
/translation="MLDMGDRKEVKMIPKSSFSINSLVPEAVQNDNHHASHGHHNSHH
PQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQL
LLPPPPPPPPAAALDGAKAVGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAG
EGGKDGEGGKEGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYY
RENKQGWQNSIRHNLSLNMCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR
STTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAY
PSHPMPYSSVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGL
SVPCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQSSTSMSARATSSSTSPQAPST
LPCESLRPSLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH"
BASE COUNT 624 a 862 c 703 g 580 t
ORIGIN
1 gagattgttt ggtactgttt tctctctggg cacctctcat ttcggaaggc catcagaggc
61 gcccactact gagcggcccc ggccgccgca gcagcacccg gagccccagt cccggtttcc
121 ccgcggtgcc ggagcccgga gctcgccgcc gcccaggcct caggaatcga aggggtggtt
181 gctgcttttg ctacatgact tgccagcgcc cgagcctgcg gtccaactgc gctgctgccg
241 tagcgctcag tgccgccgct gccgcccgcg ccccccgcgc ccagttcggc acccaccggt
301 cgccgccgcc cgccgcgccg ctgtcccgct cccgcgccgc cgccgccatt tccccccgac
361 gactgggtga tgctggacat gggagatagg aaagaggtga aaatgatccc caagtcctcg
421 ttcagcatca acagcctggt gcccgaggcg gtccagaacg acaaccacca cgcgagccac
481 ggccaccaca acagccacca cccccagcac caccaccacc accaccacca tcaccaccac
541 ccgccgccgc ccgccccgca accgccgccg ccgccgcagc agcagcagcc gccgccgccg
601 ccgcccccgg caccgcagcc cccccagacg cggggcgccc cggccgccga cgacgacaag
661 ggcccccagc agctgctgct cccgccgccg ccaccgccac caccggccgc cgccctggac
721 ggggctaaag cggtcgggct gggcggcaag ggcgagccgg gcggcgggcc gggggagctg
781 gcgcccgtcg ggccggacga gaaggagaag ggcgccggcg ccggggggga ggagaagaag
841 ggggcgggcg agggcggcaa ggacggggag gggggcaagg agggcgagaa gaagaacggc
901 aagtacgaga agccgccgtt cagctacaac gcgctcatca tgatggccat ccggcagagc
961 cccgagaagc ggctcacgct caacggcatc tacgagttca tcatgaagaa cttcccttac
1021 taccgcgaga acaagcaggg ctggcagaac tccatccgcc acaatctgtc cctcaacatg
1081 tgcttcgtga aggtgccgcg ccactacgac gacccgggca agggcaacta ctggatgctg
1141 gacccgtcga gcgacgacgt gttcatcggc ggcaccacgg gcaagctgcg gcgccgctcc
1201 accacctcgc gggccaagct ggccttcaag cgcggtgcgc gcctcacctc caccggcctc
1261 accttcatgg accgcgccgg ctccctctac tggcccatgt cgcccttcct gtccctgcac
1321 cacccccgcg ccagcagcac tttgagttac aacggcacca cgtcggccta ccccagccac
1381 cccatgccct acagctccgt gttgactcag aactcgctgg gcaacaacca ctccttctcc
1441 accgccaacg gcctgagcgt ggaccggctg gtcaacgggg agatcccgta cgccacgcac
1501 cacctcacgg ccgccgcgct agccgcctcg gtgccctgcg gcctgtcggt gccctgctct
1561 gggacctact ccctcaaccc ctgctccgtc aacctgctcg cgggccagac cagttacttt
1621 ttcccccacg tcccgcaccc gtcaatgact tcgcagagca gcacgtccat gagcgccagg
1681 gccacgtcct cctccacgtc gccgcaggcc ccctcgaccc tgccctgtga gtctttaaga
1741 ccctctttgc caagttttac gacgggactg tctgggggac tgtctgatta tttcacacat
1801 caaaatcagg ggtcttcttc caacccttta atacattaac atccctggga ccagactgta
1861 agtgaacgtt ttacacacat ttgcattgta aatgataatt aaaaaaataa gtccaggtat
1921 tttttattaa gcccccccct cccatttctg tacgtttgtt cagtctctag ggttgtttat
1981 tattctaaca aggtgtggag tgtcagcgag gtgcaatgtg gggagaatac attgtagaat
2041 ataaggtttg gaagtcaaat tatagtagaa tgtgtatcta aatagtgact gctttgccat
2101 ttcattcaaa cctgacaagt ctatctctaa gagccgccag atttccatgt gtgcagtatt
2161 ataagttatc atggaactat atggtggacg cagaccttga gaacaaccta aattatgggg
2221 agaattttaa aatgttaaac tgtaatttgt atttaaaaag cattcgtagt aaaggtgccc
2281 aagaaattat tttggccatt tattgttttg tccttttctt taaagaactg tttttttttc
2341 ttttgtttac ttttagacca aagattgggt tctagaaaat gcacttggta tactaagtat
2401 taaaacaaac aaaaaggaga gttgtttcag ttggcaacac tgcccattca attgaatcag
2461 aaggggacaa aattaacgat tgccttcagt ttgtgttgtg tatattttga tgtatgtggt
2521 cactaacagg tcacttttat tttttctaaa tgtagtgaaa tgttaatacc tattgtactt
2581 ataggtaaac cttgcaaata tgtaacctgt gttgcgcaaa tgccgcataa atttgagtga
2641 ttgttaatgt tgtcttaaaa tttcttgatt gtgatactgt ggtcatatgc ccgtgtttgt
2701 cacttacaaa aatgtttact atgaacacac agaaataaaa aataggctaa atccaaaaaa
2761 aaaaaaaaa
//