LOCUS BC050026 3091 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cerebellin 4 precursor, mRNA (cDNA clone MGC:42375
IMAGE:4820943), complete cds.
ACCESSION BC050026
VERSION BC050026.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3091)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3091)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50593529.
FEATURES Location/Qualifiers
source 1..3091
/db_xref="H-InvDB:HIT000099101"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42375 IMAGE:4820943"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3091
/gene="CBLN4"
/db_xref="GeneID:140689"
/db_xref="HGNC:HGNC:16231"
CDS 1304..1909
/gene="CBLN4"
/codon_start=1
/product="cerebellin 4 precursor"
/protein_id="AAH50026.1"
/db_xref="GeneID:140689"
/db_xref="HGNC:HGNC:16231"
/translation="MGSGRRALSAVPAVLLVLTLPGLPVWAQNDTEPIVLEGKCLVVC
DSNPATDSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNV
GNFFTLESVFVAPRKGIYSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREA
ATNGVLLYLDKEDKVYLKLEKGNLVGGWQYSTFSGFLVFPL"
BASE COUNT 738 a 715 c 804 g 834 t
ORIGIN
1 ggggggcggg ctcccggcca ggcgcggtcg ggacgcccgc cggtccccag gttcggggca
61 gcgcgcagcg cgggtccgcg gcggcttatc ctttttcgcg acccggcctg gcagcaccgc
121 gctccgcttg gagggcactc ggcggcagag ttccgcgctg ggaggggtga ggggaccagc
181 cgcctcctct gcggactcag atcgagcagg agagagtggg cgcggagctg gggccagcgc
241 agggccgtgg gctcctctct gggcacgcat cctttacgcc acgggctttc aggggctgag
301 gggcatcgaa ccttgccaat caccagtgct gtgcgccccg cttgctttgg ggtgcgttaa
361 acgtcaggag agagctgctc agatggggtc accagacgcc ttctccccct tttctcggag
421 cccgcgggtt gcgcgataag ccaacccagc cggacgctgc gctcctataa atagagcgcg
481 tgtgcccgct tcgcgctctc cgggctgcac gagggacgag aaagttgtgc gcagggactg
541 ggggcgggcg gccaggcagg agaggacccc gccggaccag ccgccctgaa cgctgcgccc
601 ggcgccctgg acctgatcct gcgaatccgc gttttcggtg cgagggacct ggctagccgc
661 tgcctccctc cctacctctg ggtgacacca ggtttggggg atttttttga ccaggcgaaa
721 gtgggagtcg ctggcgtcct ggccatgaac acagcctcgc gttcttctca gcctgggaag
781 gaccttctgc ctctgtaact cgtccctgcc gcaagccaga caggactggc acccgcgccg
841 ctgggcaccc gccacccttg tggcttctct ttgagtcccc tctttttgtt cctgctccgt
901 ggtttagctg gtggtgcttg agtttggggt gagaatttat tattattatt attttttgcc
961 ttgaggtgtg aatgtgaggg tttgatgact ttcagatgtc taggaaccag agtgggtgca
1021 ggggccccag gcagggctga ttcttgggcg gaggagagta gggtaaaggg ttctgcatga
1081 gctccttaaa ggacaaaggt aacagagcca gcgagagagc tcgaggggag actttgactt
1141 caagccacag aattggtgga agtgtgcgcg ccgccgccgc cgtcgctcct gcagcgctgt
1201 cgacctagcc gctagcatct tcccgagcac cgggatcccg gggtaggagg cgacgcgggc
1261 gagcaccagc gccagccggc tgcggctgcc cacacggctc accatgggct ccgggcgccg
1321 ggcgctgtcc gcggtgccgg ccgtgctgct ggtcctcacg ctgccggggc tgcccgtctg
1381 ggcacagaac gacacggagc ccatcgtgct ggagggcaag tgtctggtgg tgtgcgactc
1441 gaacccggcc acggactcca agggctcctc ttcctccccg ctggggatat cggtccgggc
1501 ggccaactcc aaggtcgcct tctcggcggt gcggagcacc aaccacgagc catccgagat
1561 gagcaacaag acgcgcatca tttacttcga tcagatcctg gtgaatgtgg gtaatttttt
1621 cacattggag tctgtctttg tagcaccaag aaaaggaatt tacagtttca gttttcacgt
1681 gattaaagtc taccagagcc aaactatcca ggttaacttg atgttaaatg gaaaaccagt
1741 aatatctgcc tttgcggggg acaaagatgt tactcgtgaa gctgccacga atggtgtcct
1801 gctctaccta gataaagagg ataaggttta cctaaaactg gagaaaggta atttggttgg
1861 aggctggcag tattccacgt tttctggctt tctggtgttc cccctatagg attcaatttc
1921 tccatgatgt tcatccaggt gagggatgac ccactcctga gttattggaa gatcattttt
1981 tcatcattgg attgatgtct tttattggtt tctcatgggt ggatatggat tctaaggatt
2041 ctagcctgtc tgaaccaata caaaatttca cagattattt gtgtgtgtct gtttcagtat
2101 atttggattg ggactctaag cagataatac ctatgcttaa atgtaacagt caaaagctgt
2161 ctgcaagact tattctgaat ttcatttcct gggattactg aattagttac agatgtggaa
2221 ttttatttgt ttagttttaa aagactggca accaggtcta aggattagaa aactctaaag
2281 ttctgacttc aatcaacggt tagtgtgata ctgccaaaga actgtatact gtgttaatat
2341 attgattata tttgttttta ttcctttgga attagtttgt ttggttcttg taaaaaactt
2401 ggattttttt tttcagtaac tggtattatg ttttctctta aaataaggta atgaatggct
2461 tgcccacaaa tttaccttga ctacgatatc atcgacatga cttctctcaa aaaaaaagaa
2521 tgcttcatag ttgtatttta attgtatatg tgaaagagtc atattttcca agttatattt
2581 tctaagaaga agaatagatc ataaatctga caaggaaaaa gttgcttacc caaaatctaa
2641 gtgctcaatc cctgagcctc agcaaaacag ctcccctccg agggaaatct tatactttat
2701 tgctcaactt taattaaaat gattgataat aaccacttta ttaaaaacct aaggtttttt
2761 ttttttccgt agacatgacc actttattaa ctggtggtgg gatgctgttg tttctaatta
2821 tacctatttt tcaaggcttc tgttgtattt gaagtatcat ctggttttgc cttaactctt
2881 taaattgtat atatttatct gtttagctaa tattaaattc aaatatccca tatctaaatt
2941 tagtgcaata tcttgtcttt tgtataggtc atatgaattc ataaaattat ttatgtctgt
3001 tatagaataa agattaatat atgttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3061 aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//