LOCUS BC050019 3571 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens pellino homolog 1 (Drosophila), mRNA (cDNA clone
MGC:50990 IMAGE:5296990), complete cds.
ACCESSION BC050019
VERSION BC050019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3571)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3571)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11037062.
FEATURES Location/Qualifiers
source 1..3571
/db_xref="H-InvDB:HIT000053382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50990 IMAGE:5296990"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3571
/gene="PELI1"
/db_xref="GeneID:57162"
CDS 415..1671
/gene="PELI1"
/codon_start=1
/product="PELI1 protein"
/protein_id="AAH50019.1"
/db_xref="GeneID:57162"
/translation="MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALF
KRPKANGVKPSTVHIACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQI
GRSTESPIDFVVTDTVPGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDS
SKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSL
RETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEIN
AARPQCPVGFNTLAFPSMKRKDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECP
MCRSVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFH
AACPFCAHQLAGEQGYIRLIFQGPLD"
BASE COUNT 1060 a 696 c 748 g 1067 t
ORIGIN
1 ttgtcagtga cccagaggcg gtgtgaggcg gagggaccgt cggggggcgc cgccgccgcc
61 tccactagca gcagcggcag cagccctagt cccgcggtgc ggtcgaattg gtccccagcc
121 ctccgggagc gcaccacaaa gcagccccaa cgcctctccc tgcgtccgcg gctcctcagc
181 gctcggctcc gtggtcaact tcccctcgct gggctcggct ggcgggcgcg gagggcagcg
241 gcggaacggc gggctgtctg ctcgcgctcc ccgcgcacaa cacttcaccc tctcgcctcg
301 ggtctcgggg gccgctctgg gatcccggcc accagcaatt gtccggaaat aatgcaaaag
361 gtgtcccaag gctcctgacc agtgaacaaa gatttgagaa agacagccaa gctcatgttt
421 tctcctgatc aagaaaatca tccatctaaa gcaccagtaa aatatggtga actcattgtc
481 ttagggtata atgggtctct cccaaatggc gatagaggaa ggaggaaaag taggtttgct
541 ttgtttaaaa gacctaaggc aaatggggtg aagcccagca ctgtgcatat tgcttgtact
601 cctcaggctg caaaggcaat aagcaacaaa gaccagcata gcatatcata tactttatct
661 cgggcccaga ctgtggtggt tgaatatact catgacagca acaccgatat gtttcagatt
721 ggccggtcga ctgaaagccc cattgatttt gtagtaactg acacggttcc tggaagtcaa
781 agtaattctg atacacagtc agtacaaagc actatatcaa gatttgcctg cagaatcata
841 tgtgaacgga atcctccctt tacagcacgg atttatgctg caggatttga ctcatcaaaa
901 aacatctttc ttggggagaa ggctgccaaa tggaagacat cagatggaca gatggatggc
961 ttgaccacta atggtgttct tgtgatgcat ccacgcaatg ggttcacaga agactccaag
1021 cctggaatat ggagagaaat atcggtgtgt ggaaatgtat ttagcctacg tgaaaccaga
1081 tcggctcagc agagaggaaa aatggtggaa attgaaacca atcagttaca agatggctcg
1141 ttaattgacc tctgtggtgc aacattgtta tggcgtactg cagaaggcct ttcccacact
1201 cctaccgtga agcatttaga agctttaaga caggaaatca atgcagcacg acctcagtgc
1261 cctgtagggt tcaacacact agcatttcct agtatgaaga ggaaagacgt tgtagatgaa
1321 aaacaaccat gggtatatct aaactgcggc catgtacatg gctatcataa ctggggaaac
1381 aaagaagaac gtgatggaaa agatcgtgaa tgtcctatgt gtaggtctgt tggtccctat
1441 gttcctctgt ggcttggatg tgaagctgga ttttatgtgg acgccggccc tccaacccat
1501 gcgtttagcc cgtgtgggca tgtgtgttca gaaaagacaa ctgcctattg gtcccagatc
1561 ccacttcctc atggtactca tacttttcat gcagcctgtc ccttttgtgc acatcagttg
1621 gctggtgaac aaggctacat cagacttatt tttcaaggac ctctagacta acagaccatt
1681 gtcttgcagg actacattat aaatttataa gctaagtgag ttgggttttc gaacctgttg
1741 tccacgtcac agtttttctg ctctggtcat ttgcattaag atgaagaatt ttttaaaaca
1801 tttataataa atagtagcaa tttctgagca aaaatctggg aaactcaagc aaaggaattt
1861 ctgaaagtat cagtcttctg aattctgagt tttgaaaata tattttgagg agaaaaagac
1921 atagtctaat ttgatgcctt ccttttagtg tttttgaatc acctatcctc agtgctgaaa
1981 ttgttttgta taactgaggg tactgttggt tcaaactatg ttagtttaca gtttgttgca
2041 aacattgtaa aatacagcga catgtatatt aacttttttc tatttatctt tattatagaa
2101 aataccttag aatgttcttg atagagtagc atggtaacga tggtgtcaca cccttggtgt
2161 gaatggtagc ttagtgagca acctagctca aggatttgca aagttaggaa gaaggacgag
2221 agagcctctc tccccacccc aatctaaata tggaatttgg taaattagaa tactttgtaa
2281 tttgtaagac caaattcata ctaattaccc gcgtgaaagg tgtttgtttt taacaacatt
2341 gaagataatc aggaaagatt ttttcttaat gtttctctcg agcgtagtac tataacaaaa
2401 acttaatgct aagaaacatt ttatatgctc ctttggatat gcaatttaat ctagattatc
2461 tatttttctc ccatgataac taatctgttt ttagtatcag cagcatttgg caagtttatt
2521 ttttggatat aaactgtggt tcatctgttc actgtttcta gaaaaaaatc attgccataa
2581 gaaaaagtat aaattagcaa gaaaggagag tgacttgatt tgcttttgga aaaagaaatg
2641 cttaattaat tattctgtat ttggccttat tcgggcatta ggaaatctag agatctaaag
2701 ggttgaatga caatagtgcc cccgttttta gcagaccagc cttaactctg ggtttgaatc
2761 ctaaggagat tgccacagtg agacttaagg aaatgtttgg ttggcagatg agcaccaatg
2821 actgcagcgt ggagtgacgc actgcatggt ctgtttattc tctaattcca atatgtcttt
2881 tgcttccaga agcaagaaaa gtttcttctc tcccctcctt cccacccttt tttcaaaggc
2941 accacaagta tagacagttg cactacatca aatctttttt tgacacttgt agaaaccagt
3001 acacttttag attagacagt atcttctttt aatattttga tttgttttcc tttagtttga
3061 aaagttgtat aatacttaac tgactgtagc aaagttttat atgtggtagc atacctttaa
3121 tttatcctat tacaaaactg ttctgaattt tcttttggtt tttaaaaaac aaaacttgtt
3181 gcttagaagc catgaattat tttattttac ttcaactgtc gaaacttcct tgttttaaaa
3241 aatgatcatt tgggttcact caggaaatgc atgtcaggaa acttgtatta taagtttatt
3301 agttgtgatg tatcagtaac tgctgttacc cctttttcaa agaaatgtaa ttgattttga
3361 agttttctag attgtcacat gctttgtgac taatgcaaga aagcaagtcc tgtgttgtat
3421 ttgttctagt catttttatt caggctatat attgtagctt aatttttatt tgcaattaat
3481 ttatttaaac taagtaaata cttttcaaaa taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//