LOCUS BC049220 1899 bp mRNA linear HUM 16-SEP-2005 DEFINITION Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1, mRNA (cDNA clone IMAGE:5496466), partial cds. ACCESSION BC049220 VERSION BC049220.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1899) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1899) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: n Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759139. FEATURES Location/Qualifiers source 1..1899 /db_xref="H-InvDB:HIT000099070" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5496466" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1899 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /db_xref="GeneID:9368" /db_xref="MIM:604990" CDS <1..1288 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /codon_start=2 /product="SLC9A3R1 protein" /protein_id="AAH49220.1" /db_xref="GeneID:9368" /db_xref="MIM:604990" /translation="AGRGLVCGPLSAPRGSRRPTVPGTPACLARPAAQGFSAALPVRW TGRRAGPSRPVPIGTPSRAADPSQGEMSADAAAGAPLPRLCCLEKGPNGYGFHLHGEK GKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV VDPETDEQLQKLGVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQR ELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVC MEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEI QKENSREALAEAALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILD FNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL" BASE COUNT 408 a 584 c 567 g 340 t ORIGIN 1 cgcggggcgg ggattggtct gtggtcctct ctcggctcct cgcggctcgc ggcggccgac 61 ggttcctggg acacctgctt gcttggcccg tccggcggct cagggcttct ctgctgcgct 121 cccggttcgc tggacgggaa gaagggctgg gccgtcccgt cccgtcccca tcggaacccc 181 aagtcgcgcc gctgacccgt cgcagggcga gatgagcgcg gacgcagcgg ccggggcgcc 241 cctgccccgg ctctgctgcc tggagaaggg tccgaacggc tacggcttcc acctgcacgg 301 ggagaagggc aagttgggcc agtacatccg gctggtggag cccggctcgc cggccgagaa 361 ggcggggctg ctggcggggg accggctggt ggaggtgaac ggcgaaaacg tggagaagga 421 gacccaccag caggtggtga gccgcatccg cgccgcactc aacgccgtgc gcctgctggt 481 ggtcgacccc gagacggacg agcagctgca gaagctcggc gtccaggtcc gagaggagct 541 gctgcgcgcc caggaagcgc cggggcaggc cgagccgccg gccgccgccg aggtgcaggg 601 ggctggcaac gaaaatgagc ctcgcgaggc cgacaagagc cacccggagc agcgcgagct 661 tcggcctcgg ctctgtacca tgaagaaggg ccccagtggc tatggcttca acctgcacag 721 cgacaagtcc aagccaggcc agttcatccg gtcagtggac ccagactccc cggctgaggc 781 ttcagggctc cgggcccagg atcgcattgt ggaggtgaac ggggtctgca tggaggggaa 841 gcagcatggg gacgtggtgt ccgccatcag ggctggcggg gacgagacca agctgctggt 901 ggtggacagg gaaactgacg agttcttcaa gaaatgcaga gtgatcccat ctcaggagca 961 cctgaatggt cccctgcctg tgcccttcac caatggggag atacagaagg agaacagtcg 1021 tgaagccctg gcagaggcag ccttggagag ccccaggcca gccctggtga gatccgcctc 1081 cagtgacacc agcgaggagc tgaattccca agacagcccc ccaaaacagg actccacagc 1141 gccctcgtct acctcctcct ccgaccccat cctagacttc aacatctccc tggccatggc 1201 caaagagagg gcccaccaga aacgcagcag caaacgggcc ccgcagatgg actggagcaa 1261 gaaaaacgaa ctcttcagca acctctgagc gccctgctgc cacccagtga ctggcagggc 1321 cgagccagca ttccacccca cctttttcct tctccccaat tactcccctg aatcaatgta 1381 caaatcagca cccacatccc ctttcttgac aaatgatttt tctagagaac tatgttcttc 1441 cctgacttta gggaaggtga atgtgttccc gtcctcccgc agtcagaaag gagactctgc 1501 ctcccttcct cccccatgtg ataaatgggt ccagggctga tcaaagaact ctgactgcag 1561 aactgccgct ctcagtggac agggcatctg ttaccctgag acctgtggca gacacgtctt 1621 gttttcattt gatttttgtt aagagtgcag tattgcagag tctagaggaa tttttgtttc 1681 cttgattaac atgattttcc tggttgttac atccagggca tggcagtggc ctcagcctta 1741 aacttttgtt cctactccca ccctcagcga actgggcagc acggggaggg tttggctacc 1801 cctgcccatc cctgagccag gtaccaccat tgtaaggaaa cactttcaga aattcagctg 1861 gttcctccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //