LOCUS BC049211 1690 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1,
mRNA (cDNA clone IMAGE:5241998), partial cds.
ACCESSION BC049211
VERSION BC049211.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1690)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1690)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50659085.
FEATURES Location/Qualifiers
source 1..1690
/db_xref="H-InvDB:HIT000099065"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5241998"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1690
/gene="PDSS1"
/gene_synonym="COQ1"
/gene_synonym="hDPS1"
/gene_synonym="MGC70953"
/gene_synonym="RP13-16H11.3"
/gene_synonym="TPT"
/db_xref="GeneID:23590"
/db_xref="HGNC:HGNC:17759"
/db_xref="MIM:607429"
CDS <1..1246
/gene="PDSS1"
/gene_synonym="COQ1"
/gene_synonym="hDPS1"
/gene_synonym="MGC70953"
/gene_synonym="RP13-16H11.3"
/gene_synonym="TPT"
/codon_start=2
/product="PDSS1 protein"
/protein_id="AAH49211.1"
/db_xref="GeneID:23590"
/db_xref="HGNC:HGNC:17759"
/db_xref="MIM:607429"
/translation="ASRWWRWRRGCSWKPAARSPGPGSPGRAGPLGPSAAAEVRAQVH
RRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHTTPDSKTHSGEKYTDPFKLGWRDL
KGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQAS
QRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIAL
ARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA
VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGP
VLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISK
LRPSPERDALIQLSEIVLTRDK"
BASE COUNT 580 a 339 c 348 g 423 t
ORIGIN
1 ggcctcgcgc tggtggcggt ggcggcgcgg ctgctcctgg aagccggcgg cgcggagccc
61 cgggcccggc tcccccggcc gtgcgggacc gttggggccg agcgccgctg ccgaagtccg
121 cgcgcaggtt cataggcgga agggacttga cttgtctcag ataccctata ttaatcttgt
181 gaagcattta acatctgcct gtccaaatgt atgtcgtata tcacggtttc atcacacaac
241 cccagacagt aaaacacaca gtggtgaaaa atacaccgat cctttcaaac tcggttggag
301 agacttgaaa ggtctgtatg aggacattag aaaggaactg cttatatcaa catcagaact
361 taaggaaatg tctgagtact actttgatgg gaaagggaaa gcctttcgac caattattgt
421 ggcgctaatg gcccgagcat gcaatattca tcataacaac tcccgacatg tgcaagccag
481 ccagcgcgcc atagccttaa ttgcagaaat gatccacact gctagtctgg ttcacgatga
541 cgttattgac gatgcaagtt ctcgaagagg aaaacacaca gttaataaga tctggggtga
601 aaagaaggct gttcttgctg gagatttaat tctttctgca gcatctatag ctctggcacg
661 aattggaaat acaactgtta tatctatttt aacccaagtt attgaagatt tggtgcgtgg
721 tgaatttctt cagctcgggt caaaagaaaa tgagaatgaa agatttgcac actaccttga
781 gaagacattc aagaagaccg ccagcctgat agccaacagt tgtaaagcag tctctgttct
841 aggatgtccc gacccagtgg tgcatgagat cgcctatcag tacggaaaaa atgtaggaat
901 agcttttcag ctaatagatg atgtattgga cttcacctcg tgttctgacc agatgggcaa
961 accaacatca gctgatctga agctcgggtt agccactggt cctgtcctgt ttgcctgtca
1021 gcagttccca gaaatgaatg ctatgatcat gcgacggttc agtttgcctg gagatgtaga
1081 cagagctcga cagtatgtac tacagagtga tggtgtgcaa caaacaacct acctcgccca
1141 gcagtactgc catgaagcaa taagagagat cagtaaactt cgaccatccc cagaaagaga
1201 tgccctcatt cagctttcag aaattgtact cacaagagat aaatgacaac tctttctgtt
1261 ctttctggca gctatcttac cagactgtgc ctaaagaatt ttgtggaata cactttgttt
1321 gcttcatgtg cagataacca aaaatcattt taaaagatat caaacttatt gatgggcaat
1381 ttattttttt ttattgcaaa agttttttca gaaaactttt taaatgtaat taataaacca
1441 cctgaatctg tcattctagt cctataaatt ataatcaagg tatcttgatg gttatatgtg
1501 gtattgttta cactgttaat atccacatgt aaggccatta cacaaataaa taaccaatgt
1561 taaaattcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa
//