LOCUS BC049203 3371 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens solute carrier family 44, member 1, mRNA (cDNA clone
MGC:51770 IMAGE:5492167), complete cds.
ACCESSION BC049203
VERSION BC049203.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3371)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19920322.
FEATURES Location/Qualifiers
source 1..3371
/db_xref="H-InvDB:HIT000053358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51770 IMAGE:5492167"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3371
/gene="SLC44A1"
/gene_synonym="CHTL1"
/gene_synonym="CTL1"
/gene_synonym="RP11-287A8.1"
/db_xref="GeneID:23446"
/db_xref="HGNC:HGNC:18798"
/db_xref="MIM:606105"
CDS 10..1983
/gene="SLC44A1"
/gene_synonym="CHTL1"
/gene_synonym="CTL1"
/gene_synonym="RP11-287A8.1"
/codon_start=1
/product="solute carrier family 44, member 1"
/protein_id="AAH49203.1"
/db_xref="GeneID:23446"
/db_xref="HGNC:HGNC:18798"
/db_xref="MIM:606105"
/translation="MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGF
ICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCP
KLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGL
CLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTP
EQLQIAEDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLL
VFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGL
IWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFII
TLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINS
TNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYT
VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLME
FVENSRKAMKEAGKGGVADSRELKPMASGASSA"
BASE COUNT 945 a 646 c 711 g 1069 t
ORIGIN
1 ggccccgcca tgggctgctg cagctccgcc tcctccgccg cgcagagctc caaacgagaa
61 tggaagccgc tggaggaccg tagctgcaca gacataccat ggctgctgct cttcatcctc
121 ttctgcattg ggatgggatt tatttgtggc ttttcaatag caacaggtgc agcagcaaga
181 ctagtgtcag gatacgacag ctatggaaat atctgtgggc agaaaaatac aaagttggaa
241 gcaataccaa acagtggcat ggaccacacc cagcggaagt atgtattctt tttggatcca
301 tgcaacctgg acttgataaa ccggaagatt aagtctgtag cactgtgtgt agcagcgtgt
361 ccaaggcaag aactgaaaac tctgagtgat gttcagaagt ttgcagagat aaatggttca
421 gccctatgta gctacaacct aaagccttct gaatacacta catctccaaa atcttctgtt
481 ctctgcccca aactaccagt tccagcgagt gcacctattc cattcttcca tcgctgtgct
541 cctgtgaaca tttcctgcta tgccaagttt gcagaggccc tgatcacctt tgtcagtgac
601 aatagtgtct tacacaggct gattagtgga gtaatgacca gcaaagaaat tatattggga
661 ctttgcttgt tatcactagt tctatccatg attttgatgg tgataatcag gtatatatca
721 agagtacttg tgtggatctt aacgattctg gtcatactcg gttcacttgg aggcacaggt
781 gtactatggt ggctgtatgc aaagcaaaga aggtctccca aagaaactgt tactcctgag
841 cagcttcaga tagctgaaga caatcttcgg gccctcctca tttatgccat ttcagctaca
901 gtgttcacag tgatcttatt cctgataatg ttggttatgc gcaaacgtgt tgctcttacc
961 atcgccttgt tccacgtagc tggcaaggtc ttcattcact tgccactgct agtcttccaa
1021 cccttctgga ctttctttgc tcttgtcttg ttttgggtgt actggatcat gacacttctt
1081 tttcttggca ctaccggcag tcctgttcag aatgagcaag gctttgtgga gttcaaaatt
1141 tctgggcctc tgcagtacat gtggtggtac catgtggtgg gcctgatttg gatcagtgaa
1201 tttattctag catgtcagca gatgacagtg gcaggagctg tggtaacata ctattttact
1261 agggataaaa ggaatttgcc atttacacct attttggcat cagtaaatcg ccttattcgt
1321 taccacctag gtacggtggc aaaaggatct ttcattatca cattagtcaa aattccgcga
1381 atgatcctta tgtatattca cagtcagctc aaaggaaagg aaaatgcttg tgcacgatgt
1441 gtgctgaaat cttgcatttg ttgcctttgg tgtcttgaaa agtgcctaaa ttatttaaat
1501 cagaatgcat acacagccac agctatcaac agcaccaact tctgcacctc agcaaaggat
1561 gcctttgtca ttctggtgga gaatgctttg cgagtggcta ccatcaacac agtaggagat
1621 tttatgttat tccttggcaa ggtgctgata gtctgcagca caggtttagc tgggattatg
1681 ctgctcaact accagcagga ctacacagta tgggtgctgc ctctgatcat cgtctgcctc
1741 tttgctttcc tagtcgctca ttgcttcctg tctatttatg aaatggtagt ggatgtatta
1801 ttcttgtgtt ttgccattga tacaaaatac aatgatggga gccctggcag agaattctat
1861 atggataaag tgctgatgga gtttgtggaa aacagtagga aagcaatgaa agaagctggt
1921 aagggaggcg tcgctgattc cagagagcta aagccgatgg cttcgggagc aagttctgct
1981 tgaacctagc cgacggttat ggaaacccat tgacattcca aaacaatata tacacataac
2041 tatgtatttg tgtgtgtggg tgtgtgtata tatgtatatg tatgtgtgta tatatgtata
2101 tgtatataca cacacacaca taaatcagcc aaaatcagag aaaaggaaca gggatttaat
2161 acctttttta tgcttatttt tgtcaaacat gtactccttt catacgggtg gctttacaag
2221 gcaacttccg tcatttaatg ttttcaactg taattgtctt aatggaaatg ttaaaattca
2281 tatctgatta acatttttaa taacttagag gagattttaa ctttatttaa aaataggtaa
2341 aattattgta cctaattatg tctaaagttt attcaggggt aatttccctg atgtctgtat
2401 aaaatcaaga tcttatttta ctgatgcata agtcctagtg ggtcaagact aggcatatgc
2461 tttcagataa ataaggaatt actccaatca gttttcccca atcaaagaag ccatgtcatt
2521 ttacttttag aaacatacaa ttgggcccaa tatgggaatt ttcataatag ttcatacatt
2581 tgtcagccaa cattaaaagg taaccaactc ctcaggtatt tgtagtttac cctaacgctt
2641 ctttaaaaga aagtaggtaa aaaaagaaaa gggtagataa tctttcgtat gcaaactttt
2701 cccttatatt ttgtctttct ttcctttttg actttagtag catcctccac acatttgtgt
2761 gcctgatttg aaaggaagct ggggcaccca gcgagtttag cctttaagtt tctgtgtatt
2821 gatttgcaga ttaagtaatg ctgagaggaa taaagaaggg acagaaacat ggaacataaa
2881 gcattgaaaa ttccggtgct tgggcttcgg cttcagagta acgtcagtgg cttagggtta
2941 aacggccatt ttattcaaat gcttgctata caatctgaaa acacactggc aggtgctcct
3001 ctccttggca attcattgag tatccagagt tctacgatgt ttaactgaag aattggctaa
3061 tgttttgatc ctccagtgtg actgttgttt ttgtttgggg gtgggtttgg ggttttttgc
3121 ttttttattc ctgaagctta ccagatatga atggctaata ctccattgtt ctgcttgttg
3181 taatggtgaa tgctttaaga aaaaaaagtg taatttgcta agaataattc atgatctgtt
3241 tatgcgataa ctcctttttg ttacaatttt tttaaaaaaa gctatttttg ttaatgtaaa
3301 gtaaatattt cagagcaaat tttttaaact tattgcacta aatacaggct ctgtacaaaa
3361 aaaaaaaaaa a
//