LOCUS BC048988 2618 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens chromosome 13 open reading frame 3, mRNA (cDNA clone
MGC:57410 IMAGE:5267965), complete cds.
ACCESSION BC048988
VERSION BC048988.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419927.
FEATURES Location/Qualifiers
source 1..2618
/db_xref="H-InvDB:HIT000053349"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57410 IMAGE:5267965"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2618
/gene="C13orf3"
/gene_synonym="MGC4832"
/gene_synonym="RAMA1"
/db_xref="GeneID:221150"
CDS 97..1335
/gene="C13orf3"
/gene_synonym="MGC4832"
/gene_synonym="RAMA1"
/codon_start=1
/product="C13orf3 protein"
/protein_id="AAH48988.1"
/db_xref="GeneID:221150"
/translation="MDPIRSFCGKLRSLASTLDCETARLQRALDGEESDFEDYPMRIL
YDLHSEVQTLKDDINILLDKARLENQEGIDFIKATKVLMEKNSMDIMKIREYFQKYGY
SPRVKKNSVHEQEAINSDPELSNCENFQKTDVKDDLSDPPVASSCISEKSPRSPQLSD
FGLERYIVSQVLPNPPQAVNNYKEEPVIVTPPTKQSLVKVLKTPKCALKMDDFECVTP
KLEHFGISEYTMCLNEDYTMGLKNARNNKSEEAIDTESRLNDNVFATPSPIIQQLEKS
DAEYTNSPLVPTFCTPGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNS
DTCFENLTDPSSPTISSYENLLRTPTPPEVTKIPEDILQLLSKYNSNLATPIAIKAVP
PSKRFLKHGQNIRDVSNKEN"
BASE COUNT 845 a 546 c 516 g 711 t
ORIGIN
1 tggcgtccgg cgccgagatt caaactagtg gcgggaggct gtgagctgag cggtggggtc
61 tgcgtacgcc tggagtcctt ccccgctgtg ctcagcatgg accctatccg gagcttctgc
121 gggaagctgc ggtctctggc cagcacgctg gactgcgaga cggcccggct gcagcgagcg
181 ctggacggag aggaaagcga ctttgaagat tatccaatga gaattttata tgaccttcat
241 tcagaagttc agactctaaa ggatgatatt aatattcttc ttgataaagc aagattggaa
301 aatcaagaag gcattgattt cataaaggca acaaaagtac taatggaaaa aaattcaatg
361 gatattatga aaataagaga gtatttccag aagtatggat atagtccacg tgtcaagaaa
421 aattcagtac acgagcaaga agccattaac tctgacccag agttgtctaa ttgtgaaaat
481 tttcagaaga ctgatgtgaa agatgatctg tctgatcctc ctgttgcaag cagttgtatt
541 tctgagaagt ctccacgtag tccacaactt tcagattttg gacttgagcg gtacatcgta
601 tcccaagttc taccaaaccc tccacaggca gtgaacaact ataaggaaga gcccgtaatt
661 gtaaccccac ctaccaaaca atcactagta aaagtactaa aaactccaaa atgtgcacta
721 aaaatggatg attttgagtg tgtaactcct aaattagaac actttggtat ctctgaatat
781 actatgtgtt taaatgaaga ttacacaatg ggacttaaaa atgcgaggaa taataaaagt
841 gaggaggcca tagatacaga atccaggctc aatgataatg tttttgccac tcccagcccc
901 atcatccagc agttggaaaa aagtgatgcc gaatatacca actctccttt ggtacctaca
961 ttctgtactc ctggtttgaa aattccatct acaaagaaca gcatagcttt ggtatccaca
1021 aattacccat tatcaaaaac aaatagttca tcaaatgatt tggaagttga agatcgtact
1081 tcgttggttt taaattcaga cacatgcttt gagaatttaa cagatccctc ttcacctacg
1141 atttcttctt atgagaatct gctcagaaca cctacacctc cagaagtaac taaaattcca
1201 gaagatattc tccagctttt atcaaaatac aactcaaacc tagctactcc aatagcaatt
1261 aaagcagtgc cacccagtaa aaggttcctt aaacatggac agaacatccg agatgtcagc
1321 aacaaagaaa actgaaattc cagtggatct atccaacaca gaaactgaac aaaatgagat
1381 gaaagccgag ctggaccgat tttaacattc acattgccct gcctctgtcc ccctttaaac
1441 gttgacccat tttaaagaca aacatgaaca ttaacatcat aatatgcttt ttatgaagtt
1501 tcaataaggt ttaaccttag tcttgttgac atgtagccca gtcattcact ctttaaggac
1561 tattagtgtt tcattgatac taaattaccc agcttaatca acagaatggt ttaagtagta
1621 ccaggaagta ggacaagtaa tttcaaaaat ataaaggtgt ttgctactca gatgaggccg
1681 cccctgacct tctggccaga gagacattgc tgccagccag ctctgccttc ccatcatctc
1741 ctttcaggac cgtcccacac cttttacttg ctcagtgctg tctgaagatg cagttgctgt
1801 ttgcaaacaa caggaacacc agttaaacta attaggaaaa gagggagatt tccaggcctg
1861 ggtaactata tactgtgacc attggaggta gagacaggtc tcaacagttg gaaccaggaa
1921 ctctgctgtc aggttgtgag ttttgtttct cttccagctt ttcactgtgt gggggtcttt
1981 tctcttatgt cagctctttc tatcacatgg cagctgacct ctcacgctcc actctgcagc
2041 ttggacaccc agtagaccct gaatttcact ctctctaaaa ggttctgagg gctcatcctg
2101 ggccaggggc cctcctgtgc actgttagct atggccacgg aagcctccag agctgcctgg
2161 tagcttcagg ttgacctgct tatcaggcct acgatccttc tgatttaagt acagctggaa
2221 agtattatct aattaagttc atgatagtgc ttttggagaa cttgtcaaat tacagccaat
2281 gagaaaataa ggacctagca taccgtggag aaccattaaa aatttgagaa gaaacaacaa
2341 gtattatgtc aacttacttc aaaggcgtag ttttgggaat ttgatgcagt aaagattacc
2401 ctgttttatg attgttcctt gaaagtcaaa tgggggacct gtccattgtg ctctattaat
2461 cttgtcagaa aactgtcacc aaaacaaaat ttgagtttgt ccttgttcta ggagttactg
2521 ggtagttgta agtataattt ttattaaata taatgtaaaa caaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aagaaaaaaa aaaaaaaa
//