LOCUS BC048965 3230 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens family with sequence similarity 13, member B, mRNA
(cDNA clone MGC:57159 IMAGE:5265611), complete cds.
ACCESSION BC048965
VERSION BC048965.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3230)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3230)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706136.
FEATURES Location/Qualifiers
source 1..3230
/db_xref="H-InvDB:HIT000099026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57159 IMAGE:5265611"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3230
/gene="FAM13B"
/gene_synonym="KHCHP"
/gene_synonym="N61"
/db_xref="GeneID:51306"
/db_xref="HGNC:HGNC:1335"
/db_xref="MIM:609371"
CDS 507..3170
/gene="FAM13B"
/gene_synonym="KHCHP"
/gene_synonym="N61"
/codon_start=1
/product="FAM13B protein"
/protein_id="AAH48965.1"
/db_xref="GeneID:51306"
/db_xref="HGNC:HGNC:1335"
/db_xref="MIM:609371"
/translation="MRKSSSPSLSNCNSVLANKIFGIPLDELQQGGHPDNEVPFIVRH
VVDYIEEHGGLEQQGLFQVNGNAETVEWLRQRYDSGEEVDLVKEADVPSAISLLRFFL
QELPEPVIPGSLHIHLMQLSQDYNNEDEFGRKLRFLLQQLPPVNYSLLKFLCRFLANV
ASHHEEIWSANSLAAVFGPDVFHIYTDVEDMKEQEIVSRIMAGLLENYYEFFENEEED
FSSNDLSSITEQVNELSEEEEEDEKLEHIEELPEEGAEKSNDMPEVVQLRMTENILES
NSVTATSTHISPISILPASTDILERTIRAAVEQHLFDLQSSIDHDLKNLQQQSVVCNN
EAESIHCDGEGSNNQIDIADDIINASESNRDCSKPVASTNLDNEAMQQDCVFENEENT
QSVGILLEPCSDRGDSEDGCLEREEYLLFDSDKLSHLILDSSSKICDLNANTESEVPG
GQSVGVQGEAACVSIPHLDLKNVSDGDKWEEPFPAFKSWQEDSESGEAQLSPQAGRMN
HHPLEEDCPPVLSHRSLDFGQSQRFLHDPEKLDSSSKALSFTRIRRSSFSSKDEKRED
RTPYQLVKKLQKKIRQFEEQFERERNSKPSYSDIAANPKVLKWMTELTKLRKQIKDAK
HKNSDGEFVPQTRPRSNTLPKSFGSSLDHEDEENEDEPKVIQKEKKPSKEATLELILK
RLKEKRIERCLPEDIKVTKEERHIVKPLYDRYRLVKQMLTRASITPVLGSPSTKRRGQ
MLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSSLENSESDVEENQEK
LALDLRLSSSRAASMPELLEQLWKARAEKKKLRKTLREFEEAFYQQNGRNAQKEDRVP
VLEEYREYKKIKAKLRLLEVLISKQDSSKSI"
BASE COUNT 1029 a 631 c 744 g 826 t
ORIGIN
1 cccgccagcc gctctcctcc cgctcgccgt tagggaggct ctgcacctca gccgccgcct
61 ctgtcgccac tctctccccc tgttccgcgt ctgcgtcgcc accaccgccg ggggtatccg
121 gggggtcgct taccgggctg gccccgcgcc acagccgtag ctttaacctc ccgtcagcgg
181 ccgccccagg aagaggcttc tcggccgcgg agccacttgg ggcctcagtt ctcgccctct
241 tgccgtcgcc gcgggtcctg gagaagcggc cgcggccagg gaacggggca tcgcggttcc
301 aacgattaac tgctgaagta ctgatcgagt tctgcatttc ttcaatgagg aactacaggc
361 tgatcttctg ccataatctc aaacagccat aaatgacaaa agaatgcttg ctcagtgagg
421 gtagctggtg cagaagccat tttttaaact taggtattta agtactgaaa gaaaagacag
481 ctttgatttc tggctgcaaa aaagatatga ggaagagctc ctccccttcc ttgagtaact
541 gcaactccgt tcttgctaac aaaatatttg gaattccact tgatgagctg cagcagggag
601 gacatccaga caatgaggtt ccattcatag tccgccacgt tgtggactat attgaggaac
661 atggaggtct ggagcaacaa ggactttttc aagtcaatgg aaatgctgag acagtggagt
721 ggcttcggca gagatacgac agcggagaag aggtggattt ggttaaggaa gcagatgttc
781 cctcagctat tagccttctt agattttttc ttcaagaact tcctgaacct gttatccctg
841 gcagtttaca tattcacttg atgcagcttt ctcaagatta taataatgaa gatgaatttg
901 gaagaaagtt gaggttcctc ttgcaacagc ttccacctgt taattatagt ttgttaaagt
961 ttctgtgtag atttttagcc aatgtagcat cacatcatga agaaatttgg tctgcaaatt
1021 ctttggctgc tgtctttggt ccagatgtct tccacattta cacagatgtg gaagacatga
1081 aagagcaaga aatagtgagc aggataatgg ctggacttct ggaaaactac tatgagtttt
1141 ttgagaatga agaggaagat ttttcatcta atgatttgag ttcaattact gaacaggtta
1201 atgaactttc tgaggaagaa gaggaagatg aaaagctgga acatattgaa gaacttccag
1261 aagagggtgc agaaaaatca aatgacatgc cagaggtggt acaattaagg atgactgaaa
1321 acatcctgga atcaaatagt gttacggcaa caagcaccca tatatctccc atcagcatcc
1381 taccagcctc tacagatatt ttagaaagaa caattagagc agctgtggaa cagcaccttt
1441 ttgatcttca gagcagcata gatcatgatc ttaagaattt acaacagcaa agtgtggtgt
1501 gtaataatga agcagaaagt attcattgtg atggggaagg atctaataac cagattgata
1561 ttgctgatga tattattaat gccagtgaaa gtaacagaga ctgttcaaaa cctgtggcta
1621 gcactaattt agacaatgaa gctatgcagc aagattgtgt atttgagaat gaagaaaata
1681 cccagtctgt aggtatattg ttagagccat gcagtgaccg tggtgatagt gaagatggct
1741 gtcttgagag ggaagaatat ttgttatttg acagtgataa attgtcacac ttgattctgg
1801 attctagtag caagatatgt gatttgaatg ccaacactga atcagaagta ccaggaggtc
1861 agagtgttgg tgttcaaggg gaagcagcgt gtgtcagtat tccacattta gatctgaaga
1921 atgtttctga tggtgataaa tgggaagagc catttcctgc ttttaagtct tggcaggagg
1981 actctgagtc tggagaagct cagctgtctc cacaagctgg aagaatgaat catcacccct
2041 tggaagagga ctgtcctcca gtattatcac accgcagttt agattttggt caaagccagc
2101 gtttcctaca tgatccagaa aagttggatt cctcatctaa agcactgtct tttactagaa
2161 ttcgaagatc atcctttagt tcaaaagatg aaaagagaga ggacagaaca ccttatcagc
2221 tggtcaagaa acttcagaag aaaatcagac aatttgagga acagtttgaa agggaaagaa
2281 atagcaagcc ctcctacagt gatattgctg ccaatccaaa ggtattaaaa tggatgacag
2341 agcttacaaa actgcggaag caaattaaag atgcaaaaca caaaaattct gatggagaat
2401 ttgtacctca gacacgtcca cgtagtaaca cacttccaaa aagctttggc tcttctctag
2461 accatgaaga tgaagagaat gaagatgaac ccaaggtcat tcagaaggag aaaaaaccat
2521 ctaaagaagc aacccttgaa cttattctta aaagactgaa agaaaaacgt attgagaggt
2581 gtcttccaga agatatcaag gtgaccaagg aagaaaggca cattgttaaa cctctctatg
2641 atagatacag gcttgtaaaa caaatgctga caagagctag catcactcct gtccttggat
2701 ctccatccac caagcgaagg ggtcagatgt tacagccaat catagaagga gaaactgcac
2761 atttttttga agaaatcaag gaggaagaag aagatggtgt taatctgtcc tctgagttag
2821 gtgatatgtt gaaaactgca gtacaggtac agtcttcatt agaaaactct gaatctgatg
2881 ttgaagaaaa tcaagaaaaa ctggctctgg atctccgatt gtcaagttct cgagcagctt
2941 ctatgcctga attattggaa caactttgga aagccagagc tgaaaaaaag aaactacgca
3001 aaacgttgcg ggaatttgaa gaagcatttt atcaacaaaa tggaaggaat gcccagaaag
3061 aggatcgtgt tccagtgctt gaggagtaca gagagtacaa gaaaattaaa gccaagctta
3121 ggcttcttga agttcttata agcaaacaag attcttcaaa atccatataa gatacgttcc
3181 ttgaaaattc atatcataaa gtcagttgta ttccaaaaaa aaaaaaaaaa
//