LOCUS BC048800 3380 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 47, mRNA (cDNA clone
MGC:54356 IMAGE:5215506), complete cds.
ACCESSION BC048800
VERSION BC048800.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3380)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3380)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377559.
FEATURES Location/Qualifiers
source 1..3380
/db_xref="H-InvDB:HIT000053338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54356 IMAGE:5215506"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3380
/gene="C10orf47"
/gene_synonym="MGC35403"
/db_xref="GeneID:254427"
/db_xref="HGNC:HGNC:23728"
CDS 155..1462
/gene="C10orf47"
/gene_synonym="MGC35403"
/codon_start=1
/product="chromosome 10 open reading frame 47"
/protein_id="AAH48800.1"
/db_xref="GeneID:254427"
/db_xref="HGNC:HGNC:23728"
/translation="MPVTHRKSDASDMNSDTSPSCRLRAFSRGGSLESRSSSSRSRSF
TLDDESLKYLTHEEKDVLLFFEETIDSLDEDFEEPVLCDGGVCCLCSPSLEESTSSPS
EPEDVIDLVQPAPGAGEAEGLPEGTQAAGPAPAGKEHRKQDAETPPPPDPPAPETLLA
PPPLPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMAGNEALSPTSPFR
EGRPGEWRTPAARGPRSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAV
SVQERRAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPERVARGRGLRGPAESLRAGGQ
APRGPALANGFPSAHEALKSAPSSFAPAGKSLCFRPGPALPSTRARQSFPGPRQPNGA
QDWRRADSLPRPQGITVQFAGRGSSEEARREALRKLGLLRESS"
BASE COUNT 790 a 909 c 890 g 791 t
ORIGIN
1 gggcggcggc gtgagggctc cgggtcgctg gcggcgtgga cacctgagtc ccggggtagg
61 ggtctcccgc gaggagtgag ctgttgccgc agaatgggct gctggctcct gccctgcttc
121 ctgtgatcga gccggccctg aggactctgt ggagatgcct gtaacccacc ggaaatcaga
181 cgcatctgac atgaactcag acacgtcccc cagctgcagg ctccgagcct tcagcagagg
241 cggcagcctg gagagtcgaa gcagcagctc tcgctccaga agcttcactt tggatgatga
301 gagcctgaag tacctcaccc atgaggaaaa ggatgtgctc ctgttttttg aagagacgat
361 tgactcccta gacgaggact ttgaggagcc agtgctgtgc gatggaggag tgtgctgcct
421 ctgctccccg tctctggagg agagcacctc cagtccctcc gagcctgaag atgtcatcga
481 cttagtgcag ccagcacctg gcgccgggga agccgagggc cttccagagg ggacccaggc
541 agcagggcct gcacctgctg ggaaggagca caggaaacaa gatgctgaga ctcctccacc
601 tccagacccc ccggctcccg agacccttct tgcgccacca cccctgccta gcacccccga
661 tccccccagg agggagctgc gcgccccctc cccgccggtg gagcacccca gactcctgcg
721 ctctgttccc acgcccctcg ttatggcgca gaagatttcc gagaggatgg cggggaacga
781 agccctctcg cccacctccc cgttcaggga gggccggccc ggggagtgga ggacacctgc
841 cgcccggggg ccccgcagtg gagaccctgg cccggggccc agccacccgg cgcagcccaa
901 ggcaccccgc ttccccagca acatcatcgt caccaacggc gcggcccggg agccccgcag
961 gaccctgtcc agggcggccg tcagcgtgca ggagcgcagg gcgcaggtgt tggccaccat
1021 ccacggccac gccggcgcct tccccgccgc gggggacgcc ggcgaggggg ccccaggggg
1081 cggctcctcc ccggagcggg tggcgcgtgg ccggggcctg cggggccccg ctgagagtct
1141 ccgggcaggg ggtcaggctc cgcggggccc ggcgctggcc aacggcttcc caagtgcgca
1201 cgaggccctg aagagcgcac ccagctcctt cgcgcccgct gggaagtccc tctgcttccg
1261 ccctggcccg gccctgccca gcacgcgggc ccgtcagagc ttccccgggc cccggcagcc
1321 caacggcgcc caggactggc gccgcgcaga ctccctgccc cggccccagg gcatcaccgt
1381 gcagttcgcg ggccgcggct cctcggagga ggcgcgcagg gaggccctgc ggaagctggg
1441 gctgctcagg gagagttcgt gagggccgcg cgggctccag tccaccccgt ttctccccac
1501 cctgaagaga gggtgaaaga gtcgctgcac ccaggagctg tttggtctaa aatggaagtg
1561 acagcgggag cccctgccct ctgtggcaca tcggagtcta gaggtgcctg gctggggcct
1621 cctggctgag cacgcaccgc aagctccagc caccggcaca gagaactctt ccctaaagga
1681 atctggccga gggcttgtct cccttttccc aagaactgag agagagagaa taacctgtta
1741 gacccatagg tttccgtgat gtgtaaatgc catcttttgg gggttgggag gagtaggact
1801 ggtctgatta tcattcttga gtctcatcta ccctcttctc gaagtacatg acatgaaagt
1861 tcagatccct tccactcagg attctcgccg ccttttctaa gaaaataata aaaaaaaatg
1921 cttgtttcat tttttaatgt cttaatatac ttgcttttgt ttttgaaggg tgaggcatca
1981 tggtactttg cttttgtttc ttgacgtact ttagtttgcc cagttttgtt ttttactgaa
2041 aactgaaatg aaacctttag atattgagtt ttgggagtga aatggaaagg tggtaatttt
2101 gagaaagcaa gtctcatcag actctgaggt ctgggacgtg tgcgtgagcc tgtgtttgtg
2161 tgtgtatgtt tttagatacg tacgtgtcaa cacatacatg cataggtatc ctgtgtgtcc
2221 acatgcatca ttattatata aatagaaact tctgaacacc ctcctaagtc actacaggat
2281 gccagcgctt cctattcttg ggtagacaga gccacctcag catcctgatg gatgatacaa
2341 gaaattgtta cttcctagta tggaagtgtc ttaaggacac gtctccatga tattttggtg
2401 aacccaaagt gctttatcct caacaaaatg ttcctctgtt cccagttaaa gtaatattcc
2461 ctgcttccaa gtaagcaaga ctgttcacta aagaaggaac tttttagaaa actaatctcc
2521 tttatcatcc aattttagtt ctgcatgttc cgaggtagcc agtcaacaga aggaagcaaa
2581 agattcttaa agatccaccg actgtcatgt tccacaagca agatctcagg gtagggaaaa
2641 accagtgaat gaggttacac agcaggaaaa gaaccggttt cctcccagac tatgtcttac
2701 acgctgagtt atgccacaag cgttatcatc aaaactattt aaggctggag tcttagacct
2761 ctaaaaatag acaggaaggg ctgccctgag cagtgacacc tttgtgtttt tatgtctccg
2821 ccagcgccgt aacagagcct gtttctttcc cgttgagtat tacttaaatt caggcttaaa
2881 tgtgctatga agggcatttt tcatagtatc ccatttgcct tgtaagttat ataaagtgca
2941 tgattataat tttttcctta gaaatgcaat atttagtttc atccagctct tatgaataat
3001 aacctcatag attcctgatc ttaatttaaa taggtgcttt aattttacag ctttcaaaag
3061 tagttactgt aaattttact cctgttaatg ctggattggt ttaaaggatt tataagggct
3121 gtgtttgctc tttacaaggc aagatgccat acagtgttca ataatagaag gtcttgatac
3181 aaccgacatt ttaaatattc tttatacatg aggactgcgt ctttttcact gaccctatga
3241 tttcactgtg agtagggtga actggactgc atattagttt atttgttgcc ataatcacat
3301 ttttgaaaaa taaatttaag agttttttct taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaaaa
//