LOCUS BC048769 3047 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transcription factor 7 (T-cell specific, HMG-box), mRNA (cDNA clone MGC:47735 IMAGE:6063270), complete cds. ACCESSION BC048769 VERSION BC048769.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3047) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3047) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: p Column: 18. FEATURES Location/Qualifiers source 1..3047 /db_xref="H-InvDB:HIT000053335" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47735 IMAGE:6063270" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3047 /gene="TCF7" /gene_synonym="MGC47735" /gene_synonym="TCF-1" /db_xref="GeneID:6932" /db_xref="HGNC:HGNC:11639" /db_xref="MIM:189908" CDS 197..1351 /gene="TCF7" /gene_synonym="MGC47735" /gene_synonym="TCF-1" /codon_start=1 /product="transcription factor 7 (T-cell specific, HMG-box)" /protein_id="AAH48769.1" /db_xref="GeneID:6932" /db_xref="HGNC:HGNC:11639" /db_xref="MIM:189908" /translation="MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGP ERDLAELKSSLVNESEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEP LEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQL SLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSL MLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAF MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYP GWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL" BASE COUNT 730 a 990 c 798 g 529 t ORIGIN 1 cccgccagct cgcggagccg ctctgccccg cgccctagcc cgcgcctgca gcccgcccag 61 gcggagtcag cccgcgctcc gcccgccgcg atccgagctc ggaggttcgg actccgggct 121 cgccgccccc cgggccggct ccgcgccccg cactcccggc gcccagcgcc ccgcgccccg 181 gcgggcggag cgcaccatgc cgcagctgga ctccggcggg ggcggcgcgg gcggcggcga 241 cgacctcggc gcgccggacg agctgctggc cttccaggat gaaggcgagg agcaggacga 301 caagagccgc gacagcgccg ccggtcccga gcgcgacctg gccgagctca agtcgtcgct 361 cgtgaacgag tccgagggcg cggccggcgg cgcagggatc ccgggggtcc cgggggccgg 421 cgccggggcc cgcggcgagg ccgaggctct cgggcgggaa cacgctgcgc agagactctt 481 cccggacaaa cttccagagc ccctggagga cggcctgaag gccccggagt gcaccagcgg 541 catgtacaaa gagaccgtct actccgcctt caatctgctc atgcattacc cacccccctc 601 gggagcaggg cagcaccccc agccgcagcc cccgctgcac aaggccaatc agccccccca 661 cggtgtcccc caactctctc tctacgaaca tttcaacagc ccacatccca cccctgcacc 721 tgcggacatc agccagaagc aagttcacag gcctctgcag acccctgacc tctctggctt 781 ctactccctg acctcaggca gcatggggca gctcccccac actgtgagct ggttcaccca 841 cccatccttg atgctaggtt ctggtgtacc tggtcaccca gcagccatcc cccacccggc 901 cattgtgccc ccctcaggga agcaggagct gcagcccttc gaccgcaacc tgaagacaca 961 agcagagtcc aaggcagaga aggaggccaa gaagccaacc atcaagaagc ccctcaatgc 1021 cttcatgctg tacatgaagg agatgagagc caaggtcatt gcagagtgca cacttaagga 1081 gagcgctgcc atcaaccaga tcctgggccg caggtggcac gcgctgtcgc gagaagagca 1141 ggccaagtac tatgagctgg cccgcaagga gaggcagctg cacatgcagc tatacccagg 1201 ctggtcagcg cgggacaact acgggaagaa gaagaggcgg tcgagggaaa agcaccaaga 1261 atccaccaca ggaggaaaaa gaaatgcatt cggtacttac ccggagaagg ccgctgcccc 1321 agccccgttc cttccgatga cagtgctcta ggctgccccg ggtccccagc tccccaggac 1381 tcaccctcat accatctgct gccccgcttc cccacagaac tgcttactag ccctgcggag 1441 ccggcaccta catccccagg tctctccact gctctcagcc tcccaacccc agggccccca 1501 caggcccccc gcagcaccct gcagagcaca caggtacagc aacaggaatc tcagagacag 1561 gtggcctagc aggcacagga cacctggccg cctccaggag cctaccccct gaaagtgaca 1621 gagacccaga tctcatggaa actggccagg ggtcctgtta acgtcatctc agggtccaga 1681 ccctgaagat ttcagaggct gcagaacttc tgcctgaacc tggggtcatc gattcaaact 1741 gctccaagtg gtgggaatca gatctgtctt gatgtgtcat ctaattaagg gaatcccttg 1801 tacctatggc tgcctgcatc tattctttgt accatctgtc ttgccagcca gaagcctctg 1861 cctccctagc ttttctgcta taggtcagag atgggctgaa ctgagcctag ctaccttctc 1921 tacccatctc ccccatcccc cactgccaca ccctccccat tcagacactt catggaccaa 1981 gaatgagctg gtttgtcaaa caacatgtga gcatggtcac aagcacaaag ctcaagatga 2041 cagctcttct aaggaaatgg agaagctctg tttataaaaa caaaaacaaa accagctgct 2101 actcataagt tggaccagag gaagcccctt actatgatct caggagcttg caagaagcag 2161 gaaggggaat ggaataggtt aagtttaggc ctatcaacct aagcaacaga aataatctga 2221 cactacctta tcaggcaaat tggggagggg agggtgtatc tagctctagt tcaaattatt 2281 tgaaagtgtt ccctgagaaa cccaccagcc taagaagctc tggccccagg cttgtcacta 2341 gcagctgcag tcaacagttc aaagaagtca tggcccaaat ccagtgtgca cccctcccca 2401 ttcacagagc ctttttcaca attccatttc cagttcatct atggcagtcc agccagctcc 2461 tgggcagctt gagagggcaa acccaaaacc tcatgacagc cagagcctgt ctttcagcat 2521 tcagtccgcc tggccggctc cagtttcccc atggggctgc gggacagagg accattacaa 2581 ctagatcaag gagcccagaa aacctccagt agtggacaac aggttttcac catagcctac 2641 gttaacccat ttttgagcca agcttcaacc ctcagccttg aaaaacaagt ctttaattta 2701 atttttgttt tttgcctaaa tccaaagaaa aagggctgtc gggccaggcg cggtggctca 2761 cgcctgtaat cccagcactt tggcaggccg aggcaggtgg atcacctgac gtcagtagtt 2821 tgagaccagc ctggccaaca tggtgaaacc ctgtatctac taaaaataca aaaattagcc 2881 ggacgtggtg gtgcgcgcat gtaatcccag ctactcggga ggctgaggcg gaagaatccc 2941 ttgaacccgg gaggcggagg ttccagtgag ccgaggtggc gctattgcac tccagtctgg 3001 gtaacaggga gactgcatct caaaaaaaaa aaaaaaaaaa aaaaaaa //