LOCUS BC048345 1730 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens coiled-coil and C2 domain containing 1A, mRNA (cDNA
clone IMAGE:5242270), partial cds.
ACCESSION BC048345
VERSION BC048345.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: l Column: 14.
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000098993"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5242270"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1730
/gene="CC2D1A"
/gene_synonym="FLJ20241"
/db_xref="GeneID:54862"
CDS <1..1167
/gene="CC2D1A"
/gene_synonym="FLJ20241"
/codon_start=1
/product="CC2D1A protein"
/protein_id="AAH48345.1"
/db_xref="GeneID:54862"
/translation="PGPGLSQEAARRYGELTKLIRQQHEMCLNHSNQFTQLGNITETT
KFEKLAEDCKRSMDILKQAFVRGLPTPTARFEQRTFSVIKIFPDLSSNDMLLFIVKGI
NLPTPPGLSPGDLDVFVRFDFPYPNVEEAQKDKTSVIKNTDSPEFKEQFKLCINRSHR
GFRRAIQTKGIKFEVVHKGGLFKTDRVLGTAQLKLDALEIACEVREILEVLDGRRPTG
GRLEVMVRIREPLTAQQLETTTERWLVIDPVPAAVPTQVAGPKGKAPPVPAPARESGN
RSARPLHSLSVLAFDQERLERKILALRQARRPVPPEVAQQYQDIMQRSQWQRAQLEQG
GVGIRREYAAQLERQLQFYTEAARRLGNDGSRDAAKEALYRRNLVESELQRLRR"
BASE COUNT 437 a 523 c 512 g 258 t
ORIGIN
1 cctggcccgg gtctgtctca ggaggccgcc cggcgctatg gtgaactcac caagctcata
61 cggcagcagc acgagatgtg cctgaaccac tcaaaccaat tcacccagct gggcaacatc
121 actgaaacca ccaagtttga aaagttggcg gaggactgta agcggagcat ggacattctg
181 aagcaagcct tcgtccgggg tctccccacg cccaccgccc gctttgagca aaggaccttc
241 agcgtcatca agatcttccc tgacctcagc agcaacgaca tgctcctctt catcgtgaag
301 ggcatcaact tgcccacacc cccaggactg tcccctggcg atctggatgt ctttgttcgg
361 tttgacttcc cctatcccaa cgtggaagaa gctcagaaag acaagaccag tgtgatcaag
421 aacacagact cccctgagtt caaggagcag ttcaaactct gcatcaaccg cagccaccgt
481 ggcttccgaa gggccatcca gaccaagggc atcaagttcg aagtggttca caaggggggg
541 ctgttcaaga ctgaccgggt gctggggaca gcccagctga agctggatgc actggagata
601 gcatgtgagg tccgggagat ccttgaggtc ctggatggtc gccggcccac aggggggcga
661 ctggaggtaa tggtccggat tcgggagcca ctgacagccc agcagttgga gacgacgaca
721 gagaggtggc tggtcattga ccctgtgccg gcagctgtgc ccacacaggt tgctgggccc
781 aaagggaagg cccctcctgt gcctgcccct gcaagggagt cagggaacag atcagcccgg
841 cccctgcata gcctcagtgt gctggcgttt gaccaagagc gtctggagcg gaagatcctg
901 gccctcaggc aggcgcggcg gccggtgccc ccagaagtgg cccagcagta ccaggacatc
961 atgcaacgca gccagtggca gagggcacag ctggagcagg ggggtgtggg catccgacgg
1021 gaatacgcag cccagctgga gcggcagctg cagttctaca cggaggctgc ccggcgcctg
1081 ggcaacgatg gcagcaggga tgctgcaaag gaggcgctct ataggcggaa tctggtagag
1141 agtgagctgc agcggctccg caggtgagga gcccatgggg cgggcagccc ccagaaagcg
1201 ggcagcaggc cccgataccg ggaagagccg acacagccac gaaccagaca agcagacaat
1261 cagcggacaa tcggttctgg actcacccct catccgggcc cccagccccg ccagagcctc
1321 cgtggctgcg ggtgttggga accatgcctg ccagccagta tgtgcccctc acccaggcct
1381 ggctgggccc tggagagtcc tgtttgcaca gcccaggggt gtccggcctc tggcccgccc
1441 cggagcaggg agggtggctg gggccaagcc ccgagggccc ctgcaagcac tttacttcct
1501 gttcctcccc agccttaacc ccaaagccct cctgcacccc aaagaagcca ctgaggctgg
1561 ccgagccaca ctgtctcccc aggggcgtcg acctggccca gctgggtccc cagggccagc
1621 acatggaata aaatagccag ggccacactc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//