LOCUS BC048301 2162 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens zinc finger, CCHC domain containing 11, mRNA (cDNA clone IMAGE:5505348), with apparent retained intron. ACCESSION BC048301 VERSION BC048301.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2162) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2162) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: n Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 57863249 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..2162 /db_xref="H-InvDB:HIT000053322" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5505348" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 728 a 399 c 443 g 592 t ORIGIN 1 gggagagcag gagccactga gatgaggagg cgtcgcgcgc gcctgtagct cgcgggcctc 61 gcagtttgct tgcctaaact ggacttgaag caatttaaac tactggagat ctgccatttt 121 ataatatcac aattggaaag aaacagattt tcaaataatg gaagagtcta aaaccttaaa 181 aagtgaaaat catgaaccaa agaagaatgt tatttgtgaa gaaagcaaag cagttcaagt 241 tataggtaat caaacattga aagctagaaa tgataaatcc gtaaaagaaa ttgagaacag 301 ctctccaaat aggaatagta gtaaaaaaaa taagcaaaat gatatttgta tagaaaaaac 361 agaagttaaa tcatgtaaag taaatgctgc caaccttcca ggtcctaaag atttggggtt 421 agtccttcga gatcaaagtc attgcaaagc aaaaaaattt cctaattcac cggtgaaagc 481 cgaaaaggca accatttcac aggcaaaatc agaaaaggca accagtttac aggcaatagc 541 agaaaaatca ccaaagtcac ctaattcagt gaaagcagaa aaagcatcca gttatcagat 601 gaagtcagaa aaagtaccaa gttcaccagc agaagcagaa aagggaccca gtttactgtt 661 gaaagacatg agacagaaga cagaattaca acagattgga aaaaaaattc caagctcctt 721 tacttctgtg gacaaagtga atattgaagc tgtaggggga gaaaaatgtg ctctgcaaaa 781 ctcaccacga tctcagaagc aacagacatg tacagataat actggtgatt ctgatgatag 841 tgcttcagga attgaagacg tatcggacga tttaagtaaa atgaagaatg atgaatctaa 901 taaagaaaat tcttcagaga tggactactt agaaaatgcc actgtgatag atgaatctgc 961 attgacacct gagcagaggc tggggttgaa acaagcagaa gaacgcttag aaagagatca 1021 catctttcga cttgaaaaag tatactatgt tgttttagtt atttgggggg aaatgtgtgt 1081 ttcataactg ttttccccaa gtacagcttt ttttattttt cttttattca taagacagag 1141 gttgcattca tctttcctta cttccctctt ctctaccttt cttcttcttt ccctcttttc 1201 ttccttgcct ctctttttca gcagttactt attatctgtg agtctgactt cattcatccc 1261 aagagttggc aaactatggt ctatcccttg cttttgtttt tgaatgggtt aaaatacacc 1321 tagtctcccc accgtttttg gtaaacattt tattggaata tagccatgcc tatttgttta 1381 catgtcgttt atggctactt tcatgctacg atgggaaatt tgagttgagt agttgtcaca 1441 gagcttatat ggcttgaaaa gcataaaata tttagtcttt gccaaagcat aaaatgtcta 1501 ccaaaatatt tattcgcccc tttatagacg aaacttgctg acctctgatt taggcactca 1561 tcaaatagac actgagcact tgttttgtgc caggtattct gataggcact ggggatgtat 1621 tggtgaaaat ggcagtttct tcccattaga agttaaaagt ccattcagat tgatggaaat 1681 aaaatagcat tttatttatt gaacctgtat ttattgaaca ttaactgcgt aataggaact 1741 atcctagcca ttggtatctt attcctgtgt attaatttct taatctagaa atacacattc 1801 ctggcctcaa taaaaacact gctaggtttt gaaggaaaga atcacaaatc acggccaggc 1861 ccagtggctc acgcctgtaa tcccagcatt ttgggaagcc gaggtgggca ggttgcttga 1921 ggtcaggaat tcgagaccag cctgaccaac atggtgaaac cccgtctcta ctaaaaatac 1981 aaaaattagc gaggtgtggt agtcggtacc tgtagtccca gctacttggg aggctgaggc 2041 aggagaattg cttgaaccca gggggcagag gttgcggtga gccaagattg tgccactgca 2101 caccagcctg ggcgacagag caagactcca tctcaaaaaa aaaaaaaaaa aaaaaaaaaa 2161 aa //