LOCUS BC048267 3651 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 140, mRNA (cDNA clone
MGC:54377 IMAGE:4343586), complete cds.
ACCESSION BC048267
VERSION BC048267.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3651)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3651)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341967.
FEATURES Location/Qualifiers
source 1..3651
/db_xref="H-InvDB:HIT000053312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54377 IMAGE:4343586"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3651
/gene="C9orf140"
/db_xref="GeneID:89958"
/db_xref="HGNC:HGNC:28055"
CDS 132..1301
/gene="C9orf140"
/codon_start=1
/product="chromosome 9 open reading frame 140"
/protein_id="AAH48267.1"
/db_xref="GeneID:89958"
/db_xref="HGNC:HGNC:28055"
/translation="MAERGRVPPPAPAPSTEGLPRAFLQSLRTLFDILDDRRRGCVHL
REIESRWQGTDARELPRGVLEGLRQVAPASGYLTFERFVAGLRTSLLSADGGPRDPTR
APARPGDQPPPPPQRLVFAPADEPRTVLERKPLPLGVRAPLAGPSAAARSPEQLCAPA
EAAPCPAEPERSQSAALEPSSSADAGAVACRALEADSGDARRAPRARGERRRHTIASG
VDCGLLKQMKELEQEKEVLLQGLEMMARGRDWYQQQLQRVQERQRRLGQSRASADFGA
AGSPRPLGRLLPKVQEVARCLGELLAAACASRALPPSSSGPPCPALTSTSPPVWQQQT
ILMLKEQNRLLTQEVTEKSERITQLEQEKSALIKQLFEARALSQQDGGPLDSTFI"
BASE COUNT 612 a 1232 c 1253 g 554 t
ORIGIN
1 gccccattca aaagtagtcg ctattgtcgc cgtgggctga gctcgccggg ccggcccctc
61 cgtggggccg cgctgggacg cacgcgggtg gacgagggga ccgatcccgg gtgcccatgg
121 ccggggccgc catggccgag cggggccgcg tgcctccccc cgcacccgcg cccagcacgg
181 aggggctgcc gcgcgccttc ctgcagagcc tgcgcaccct gttcgacatc ctggacgacc
241 ggcggcgcgg ctgcgtgcac ctgcgcgaga tcgagtcccg ctggcagggc accgacgcgc
301 gggagctgcc ccgcggggtg ctggagggct tgcgccaggt ggccccggcc agcggctacc
361 tgaccttcga gcgcttcgtg gccggcctgc gcacctccct gctgagcgcc gacggcggcc
421 cccgggaccc cacgcgcgcc ccggcccggc ccggggatca gccgccgccg ccgccgcagc
481 gcctggtgtt cgctccggcc gacgagccgc ggacggtcct ggagaggaag cccctgcccc
541 tgggcgtgcg cgcccctctg gccggtccca gcgccgccgc ccgcagcccg gagcagctgt
601 gcgccccggc tgaggcggcg ccctgccccg cggagcccga gcggtcccag agcgcggcgc
661 tggaaccgag ctccagcgcg gacgcaggtg cagtggcgtg cagggccctg gaggcggact
721 caggggatgc ccggcgggct ccccgtgccc gaggggaacg tcggaggcac accatcgcca
781 gcggcgtgga ctgcggcctg ctgaagcaga tgaaggagct ggagcaggag aaggaggtgc
841 tgctgcaggg tttggagatg atggcgcggg gccgcgactg gtaccagcag cagctgcaac
901 gagtgcagga gcgccagcgc cgcctgggcc agagcagagc cagcgccgac tttggggctg
961 cagggagccc ccgcccactg gggcggctac tgcccaaggt acaagaggtg gcccggtgcc
1021 tgggggagct gctggctgca gcctgtgcca gccgggccct gcccccgtcc tcctccgggc
1081 ccccctgccc tgccctgacg tccacctcac ccccggtctg gcagcagcag accatcctca
1141 tgctgaagga gcagaaccga ctcctcaccc aggaggtgac cgagaagagt gagcgcatca
1201 cgcagctgga gcaggagaag tcggcgctca ttaagcagct gtttgaggcc cgcgccctga
1261 gccagcagga cgggggacct ctggattcca ccttcatcta gtccttgtgg gccgcgtggg
1321 cccccagggc cagcctggca ctcagccctt cgagggtggg cgccccatcg cacccaccct
1381 ctctggctgg agacccccgg caggcccagg cacagtcccg gagtgggcgc cttcctgccg
1441 cccttgccag atgggctccc caggcctgcc cccggctggt ccccgcaccg agcgcttgac
1501 tccgttttgg ctcctggtgc tgacatgggc tggggctctc ttgagtccgc atagtccgca
1561 gctactactg ccgctgtcag tggacagtgg ggtacccctc catgagttag cgtccccccg
1621 tttccagcgg tgccgccctg ggtcccatct tcagggaaag gcactgccca cgccaggctg
1681 cacttccaac aacgggcagc agagggcgcg gggcggctcc gacgcgggtc caagggcagc
1741 ttcccgctca accagggcac caggacgagg tggctgtagc tcggacggac ggaagtagat
1801 ggagggggtg gggacggcct gtaagcgggg ggtgcctgcc tggctgggga gccccaggga
1861 tagcggtcgg acttcaggtt ctggccaagg ctgagggacc ctggctgcag cggatcggca
1921 cgccgggtgg gcgagagctt ggcctgcatg tgcctcccac agaccctggg gtgatggcct
1981 tccccctctt ggccgggacg ttgccccacg ttgagtccca cacaacatcc tgtgagcctg
2041 gctccccagg agggccccca gacagctccc aggcacgtca taggcaaagc ctgttccccc
2101 gactcaggat ttccaaggcc tggggtcctg ctcacccccc tttgctctca cgcccagcct
2161 gtccccaggt ttcagctggg agaggccacc tccctcagcc aaggaaaacg agaaccccca
2221 gggtacagga ggaggctggg gcaggtcccc ttgggtgtca ctccctcagc ccctgcccag
2281 gcccactccc gctggtgctg gagtacgcac tggtgggggg gccctgctca gcccaacctg
2341 gagggtccca gtgtcaccag aaccaggggc acggcaacag catcgatggg ttctgcagcc
2401 cagggccccc gatgcggggt cagtgcgtgg ggggcgcagg gcccccgatg ccgatgcggg
2461 gtcagtgtgt gtggggcgca gggcctccga tgcggggtca gtgcgtgggg ggcgcagggc
2521 cccctcgtgt ccagggcact ttggtacact gtcccacaag gcacctgtct cagaggaggg
2581 gccctggcag gcagcgtggc aactcccttc cggagcccag ctccatgcta acctgcccac
2641 agcaacccca cagagccaca ttccctgctg cacctggtct gcaggggtgc cccaggacag
2701 gcccaagtca gcccagcatg cagctgccct cctaccctga agatgggagt gggctttcca
2761 ggggacataa ggatgtcagg cctggacctc ctgggcagga aagggtgcag gtcctgaggg
2821 cctgtgcccc acagccccag caccaggtgg actgcagcgc agtgggtggg ccagtggcag
2881 ccagggagaa gccccccgtc agcaggctgg ggtctgccca ccagggcctc cccacgtctg
2941 cctttgaggg tgcctgccat gccctggggg atcctggcat ctttactgga ctggaagcag
3001 gagacagaac agtgtctgtc ccggggtgac ttcatcagga gaccgcccac atagagctgg
3061 accccgcagc tgaagcggaa atgtgagaca ggctggcacc tccggaaaaa ctgcctttca
3121 gccttggtgt tccgtgcaag gtgaaaagaa ataggtcctc ccagtttaca gcttgaaatc
3181 aggctagtga gtggccctgg agaccacgag gggagaattt aaaggccccg gctggcaggg
3241 tctaggtggc tggcagaggc acatgcagac cctgcctgga gcctgcccta ggacgctggg
3301 cgggtcagtc tccgtgcagg atgtgagcag cgtccctggg ctctatccgc gaggtgccag
3361 tagcgtgtgc aggtacatac acgtgcgtgc acactgtgat gacacccgga aatgtctcag
3421 gatgttgaaa tgtgtccttg ggggcagaag tgtccccagt tgagaatctg ccccagagga
3481 acacacccac accaggcctc aggattttgt gttgatcaag ttccaaggaa aaggaacatc
3541 tcagccgggc gtggtggttc acgcctggaa tcccagcact tgaggccagg agttccagag
3601 cagcctgggc aacgcagtga gagaccccat ctctacaaaa aaaaaaaaaa a
//