LOCUS BC048215 1699 bp mRNA linear HUM 30-JUN-2006
DEFINITION Homo sapiens syntrophin, beta 2 (dystrophin-associated protein A1,
59kDa, basic component 2), mRNA (cDNA clone MGC:52142
IMAGE:5805707), complete cds.
ACCESSION BC048215
VERSION BC048215.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1699)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1699)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860911.
FEATURES Location/Qualifiers
source 1..1699
/db_xref="H-InvDB:HIT000053306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52142 IMAGE:5805707"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1699
/gene="SNTB2"
/gene_synonym="EST25263"
/gene_synonym="SNT3"
/db_xref="GeneID:6645"
/db_xref="HGNC:HGNC:11169"
/db_xref="MIM:600027"
CDS 6..1628
/gene="SNTB2"
/gene_synonym="EST25263"
/gene_synonym="SNT3"
/codon_start=1
/product="syntrophin, beta 2 (dystrophin-associated
protein A1, 59kDa, basic component 2)"
/protein_id="AAH48215.1"
/db_xref="GeneID:6645"
/db_xref="HGNC:HGNC:11169"
/db_xref="MIM:600027"
/translation="MRVAAATAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELS
GESLSLTGDAAAAELEPALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRG
PAGEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLG
DAILSVNGTDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGA
APQSPSFSGSEDSGSPKHQNSTKDRKIIPLKMCFAARNLSMPDLENRLIELHSPDSRN
TLILRCKDTATAHSWFVAIHTNIMALLPQVLAELNAMLGATSTAGGSKEVKHIAWLAE
QAKLDGGRQQWRPVLMAVTEKDLLLYDCMPWTRDAWASPCHSYPLVATRLVHSGSGCR
SPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSSWTRILVQGCHAAAELIKEVSLGC
MLNGQEVRLTIHYENGFTISRENGGSSSILYRYPFERLKMSADDGIRNLYLDFGGPEG
ELTMDLHSCPKPIVFVLHTFLSAKVTRMGLLV"
BASE COUNT 388 a 473 c 517 g 321 t
ORIGIN
1 ctggaatgag ggtagctgcg gcgactgcgg cggctggagc ggggccggcc atggcggtgt
61 ggacgcgggc caccaaagcg gggctggtgg agctgctcct gagggagcgc tgggtccgag
121 tggtggccga gctgagcggg gagagcctga gcctgacggg cgacgccgcc gcggccgagc
181 tggagcccgc tctgggaccc gcggccgccg ccttcaacgg cctcccaaac ggcggcggcg
241 cgggcgactc gctgcccggg agcccaagcc gcggcctggg gcccccgagc ccgccggcgc
301 cgcctcgggg ccccgcgggt gaggcgggcg cgtcgccgcc cgtgcgccgg gtgcgggtgg
361 tgaagcaaga ggcgggcggc ctgggcatca gcatcaaggg cggccgcgag aaccggatgc
421 cgatcctcat ctccaagatc ttccccgggc tggctgccga ccagagccgg gcgctgcggc
481 tgggcgacgc catcctgtcg gtgaacggca ccgacctgcg ccaggccacc cacgaccagg
541 ccgtgcaggc gctgaagcgc gcgggcaagg aggtgctgct ggaggtcaag ttcatccgag
601 aagtaacacc atatatcaag aagccatcat tagtatcaga tctgccgtgg gaaggtgcag
661 ccccccagtc accaagcttt agtggcagtg aggactctgg ttcgccaaaa caccagaaca
721 gcaccaagga caggaagatc atccctctca aaatgtgctt tgctgctaga aacctaagca
781 tgccggatct ggaaaacaga ttgatagagc tacattctcc tgatagcagg aacacgttga
841 tcctacgctg caaagataca gccacagcac actcctggtt cgtagctatc cacaccaaca
901 taatggctct cctcccacag gtgttggctg aactcaacgc catgcttggg gcaaccagta
961 cagcaggagg cagtaaagag gtgaagcata ttgcctggct ggcagaacag gcaaaactag
1021 atggtggaag acagcaatgg agacctgtcc tcatggctgt gactgagaag gatttgctgc
1081 tctatgactg tatgccgtgg acaagagatg cctgggcgtc accatgccac agctacccac
1141 ttgttgccac caggttggtt cattctggct ccggatgtcg atccccctcc cttggatctg
1201 accttacatt tgctaccagg acaggctctc gacagggcat tgagatgcat ctcttcaggg
1261 tggagacaca tcgggatctg tcatcctgga ccaggatact tgttcagggt tgccatgctg
1321 ctgctgagct gatcaaggaa gtctctctag gctgcatgtt aaatggccaa gaggtgaggc
1381 ttactattca ctatgaaaat gggttcacca tctcaaggga aaatggaggc tccagcagca
1441 tattgtaccg ctaccccttt gaaaggctga agatgtctgc tgatgatggc atccgaaatc
1501 tatacttgga ttttggtggt cccgagggag aactgaccat ggacctgcac tcttgtccga
1561 agccgattgt atttgtgttg cacacgtttt tatcggccaa agtcactcgt atgggactgc
1621 ttgtatgagc aacaaaaaat cagaaaagag ccttgactgt cacaagaaat atttccacct
1681 caaaaaaaaa aaaaaaaaa
//