LOCUS BC048210 1792 bp mRNA linear HUM 13-DEC-2004
DEFINITION Homo sapiens PHD finger protein 20, mRNA (cDNA clone
IMAGE:5808885), partial cds.
ACCESSION BC048210
VERSION BC048210.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1792)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1792)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40804464.
FEATURES Location/Qualifiers
source 1..1792
/db_xref="H-InvDB:HIT000098924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5808885"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..>1792
/gene="PHF20"
/gene_synonym="C20orf104"
/gene_synonym="GLEA2"
/gene_synonym="HCA58"
/gene_synonym="NZF"
/gene_synonym="TZP"
/db_xref="GeneID:51230"
CDS 145..>1792
/gene="PHF20"
/gene_synonym="C20orf104"
/gene_synonym="GLEA2"
/gene_synonym="HCA58"
/gene_synonym="NZF"
/gene_synonym="TZP"
/codon_start=1
/product="PHF20 protein"
/protein_id="AAH48210.1"
/db_xref="GeneID:51230"
/translation="MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVL
IHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEDGSSEFQINEQVLACWSDCRF
YPAKVTAVNKDGTYTVKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKETDHKSLSSSP
DKREKFKEQRKATVNVKKDKEDKPLKTEKRPKQPDKEGKLICSEKGKVSEKSLPKNEK
EDKENISENDREYSGDAQVDKKPENDIVKSPQENLREPKRKRGRPPSIAPTAVDSNSQ
TLQPITLELRRRKISKGCEVPLKRPRLDKNSSQEKSKNYSENTDKDLSRRRSSRLSTN
GTHEILDPDLVVSDLVDTDPLQDTLSSTKESEEGQLKSALEAGQVSSALTCHSFGDGS
GAAGLELNCPSMGENTMKTEPTSPLVELQEISTVEVTNTFKKTDDFGSSNAPAVDLDH
KFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQE
TLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKPKKKKKKKK"
BASE COUNT 630 a 349 c 428 g 385 t
ORIGIN
1 ctggagcggc gcagccggag tggggccgtg agcacgagta cacgagacag gattgagaaa
61 ggagagattc aaattgtgac ttcagattca aaggcaatta aaggaattaa acgagaataa
121 aggcagcccc gttgatgact gaaaatgaca aagcatccac ctaacagacg aggaatcagc
181 tttgaagtgg gagcccagtt ggaagcccgg gaccgtttaa aaaactggta tccagctcac
241 atagaagaca ttgactacga ggaaggaaaa gtactcatcc atttcaagcg ttggaaccat
301 cgttatgatg agtggttctg ctgggacagt ccttatttac gccctttaga gaaaatacag
361 ctgaggaaag agggcttgca tgaagaggat ggatcttctg aatttcaaat aaatgagcag
421 gtccttgctt gctggtctga ttgtcgtttt tacccggcca aagtcactgc tgttaacaag
481 gatggtactt acactgtgaa attttatgat ggagtagttc agactgtcaa acatattcat
541 gtcaaagctt tttccaaaga tcagaatatt gtgggtaatg ctaggcctaa agaaacagat
601 cacaaaagtc tttcatcatc tcctgataaa cgagagaagt ttaaagaaca gagaaaagca
661 acagtgaatg tgaagaaaga caaagaagat aaacccttaa agacagaaaa gcgacccaag
721 cagcctgata aagaaggaaa gttaatctgt tctgaaaagg ggaaagtgtc agagaaaagt
781 cttcccaaga acgagaagga agacaaggaa aacatttccg aaaatgacag agagtattct
841 ggagatgccc aagtggataa gaaacctgaa aatgacattg tgaagagtcc acaagaaaac
901 ttgagggaac ccaaaagaaa acgaggcaga cccccttcca tagctcctac tgctgtggat
961 tcaaactctc aaactttgca accaataaca ttggaactga gaagaaggaa aatatcaaaa
1021 ggatgtgaag tcccattaaa acgtcctcgg cttgacaaaa attcatccca ggaaaagtca
1081 aaaaactact cggaaaacac tgacaaagac ttatcgagga gacgttcctc caggctgtcc
1141 actaatggga cccatgagat cctagatcct gacttggttg tatcagattt ggttgatacg
1201 gatcctttgc aagacacgtt gtctagtacc aaggaatctg aagaaggtca gttgaagtct
1261 gctttggaag ctggccaggt ctcatctgca ctgacttgcc actcctttgg ggatggatcc
1321 ggggctgcag gcttggagtt gaactgccca tcaatgggag aaaacacgat gaaaacagaa
1381 ccgacttctc cccttgtgga attacaagag atttcgactg tggaagtaac aaatactttt
1441 aagaaaacag atgattttgg gtcatctaat gcaccagctg tcgacctaga ccataagttt
1501 agatgcaaag ttgtggactg tttaaaattt ttccgcaaag ccaaactgtt gcactatcac
1561 atgaagtatt tccatggaat ggagaagtca ctggagccag aagagagccc gggaaagagg
1621 catgtccaaa ccaggggccc ttcagcttca gacaagccca gccaggagac cctgaccagg
1681 aagcgggtct ctgccagttc cccaactaca aaagacaagg aaaagaataa agagaagaaa
1741 ttcaaggagt ttgtgagagt gaagccaaag aagaaaaaaa aaaaaaaaaa aa
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