LOCUS BC048196 1868 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens G protein-coupled receptor kinase interacting ArfGAP
1, mRNA (cDNA clone IMAGE:5467199), partial cds.
ACCESSION BC048196
VERSION BC048196.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1868)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1868)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41393572.
FEATURES Location/Qualifiers
source 1..1868
/db_xref="H-InvDB:HIT000098911"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5467199"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1868
/gene="GIT1"
/db_xref="GeneID:28964"
/db_xref="HGNC:HGNC:4272"
/db_xref="MIM:608434"
CDS <1..772
/gene="GIT1"
/codon_start=2
/product="GIT1 protein"
/protein_id="AAH48196.1"
/db_xref="GeneID:28964"
/db_xref="HGNC:HGNC:4272"
/db_xref="MIM:608434"
/translation="REEPRAAAGRRGAEGARGRAGRRARRVPGQPRGGRLAGRAEPRR
GLAGAGPGSRGRRRRPGPPPAPPTLAQRAAAASPLRMSRKGPRAEVCADCSAPDPGWA
SISRGVLVCDECCSVHRSLGRHISIVKHLRHSAWPPTLLQMVHTLASNGANSIWEHSL
LDPAQVQSGRRKANPQDKVHPIKSEFIRAKYQMLAFVHKLPCRDDDGVTAKDLTGHRS
WATPDINPHPNRATGTSALSAATLPGSQVPWCPPLSSP"
BASE COUNT 345 a 624 c 566 g 333 t
ORIGIN
1 gagagaggag ccgcgagcgg cggcggggcg gcgcggggcg gagggcgccc gagggcgagc
61 gggcaggcgg gcacggcggg ttccgggcca gccccggggc ggacggttgg ccgggcgcgc
121 ggagcctcgc cggggcctcg ccggagccgg gccgggcagc aggggccgcc gccgccgccc
181 gggcccgccg cccgcgcccc ccacgctggc ccagagggct gcggccgcgt cgccgctgag
241 gatgtcccga aaggggccgc gagcggaggt gtgtgcggac tgcagcgccc cggaccctgg
301 ctgggcatcc atcagcaggg gtgtgctggt gtgtgacgag tgctgcagcg tgcaccggag
361 cctgggacgc cacatctcca ttgtcaagca ccttcgccac agcgcctggc ctcccacgct
421 gctgcagatg gtgcacacgc ttgccagcaa cggggccaac tccatctggg agcactccct
481 gctggacccc gcacaagtgc agagcggccg gcgtaaagcc aacccccaag acaaagtcca
541 ccccatcaag tcagagttca tcagggccaa gtaccagatg ctggcatttg tgcacaagct
601 tccctgccgg gacgatgatg gagtcaccgc caaagacctc actggccata ggagctgggc
661 cactccagac attaatcccc accccaacag agccactggc acaagtgccc ttagtgctgc
721 cacactccct ggcagccagg tgccctggtg cccacccctg tcgagcccct aaggatgggg
781 aggtgggggg gcaggagctt ctgtccccca cattccatgc acctcccctc tgtatatagc
841 atctcccccc tcctagtgag caggggcctg caaggcatca ctcccagccc ctcgccttct
901 agggcaccct cagcaaaggg gcaggtgggg acactccaag tggggcagct ctccgtacat
961 gcgccccacc cccatgagcc agttcagccc tactgggggc tgagcggggg catcccctcc
1021 tttgtacata gtctccatgg atgtccctgc cctgtagcca ccagcccctt gctgctctcc
1081 ctttaatgcc atatggcccc tgcctagggc acaggcccca acctgtgtgc tggggtcccc
1141 agcagcaaac actggaaagt ctgttttttt tttttctttc ttcttcccca ccccttaatt
1201 ttaactttgt ggtaactgag tgcccccgcg tgcctgcgtg ttgagtgtgt gggcggcagt
1261 gccgttccgg aggcctggtc catctggagt tttgaggggt gaggggacca gagcagtggg
1321 accagcatgg ggatcagctt cccttcccca cctggagcca gggactgtcc gggtagccag
1381 ttttggtcct gccagctgcc tccctgatcc ctccccactc tcgccccttc tctatgaact
1441 taaatcaaaa accacttccc tccatctcct cctgctcctg cgtggagggg gaatgtgtgc
1501 tggctagggt ggaggactga gcacctgagc ctggggctgg ctccccgggg tccccgactc
1561 agctggtggc tgtggagctg agtcccctcc ccgtaacctc tgcaaggcca gcacccacca
1621 tcactacctg cacctgctgt ggtcccaccc tctggaggcc tgggaacctg gctgcagcct
1681 gggaaggctg gagaggcaga cggtgggacc caccagctct ctccccatcc cgcttcttcc
1741 ctgggggcca ggccctacct gtgtggtggt gggtgggctg tcaagacgtg tcatgtacat
1801 ttgtatcaaa aataaagaag tgaccatgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaa
//