LOCUS BC048120 2801 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens chromosome 12 open reading frame 40, mRNA (cDNA clone MGC:57397 IMAGE:5266211), complete cds. ACCESSION BC048120 VERSION BC048120.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2801) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2801) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 106 Row: j Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27734764. FEATURES Location/Qualifiers source 1..2801 /db_xref="H-InvDB:HIT000053297" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57397 IMAGE:5266211" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2801 /gene="C12orf40" /db_xref="GeneID:283461" /db_xref="HGNC:HGNC:26846" CDS 155..2113 /gene="C12orf40" /codon_start=1 /product="chromosome 12 open reading frame 40" /protein_id="AAH48120.3" /db_xref="GeneID:283461" /db_xref="HGNC:HGNC:26846" /translation="MNWVGGSRSRVLIKQERRKQKEYFEKHRLKSKMKSLGVLSPVKN SAVSLDILNLYMVNQISCKKKIPETVRKPTHVNMNRDIKMPLRKHNLELTMSPHCVPS KLCLDDTETNVNCQRLSSKEDLGPVQSQGMDSYSMLHPQFSKIENCSFTPSSFSVELP SNRHISKLNFTSGIAPTPQKLAYEKKQNDQRSTVNCSDSLLSKLNKSQDVFSPSHKTT RFGTLFERLNSLGNRNLLTKSPAVIMDEDCRSTDEIRQSDYITEKHSIQHIWGKNGKE VSNFLEDVNQSTPNLLSENCDSFVSQNMINVLNIDEQRIKKTFNKCDYDSMGDTCVVT SSDKNHVTDRCIRNIFTVPELTFSNSTLNKTSYPEKCQPNKKYQREYNKNERNDLSTS FENDYYPSSSERKEKFENDYQEKTPQKSIQKYPANSMGNIPSEELHSKQSWDFGLDEI LMEEGGIYSLKSKRISTKKISLDSAQSSRSTSYSPRPTDSCFSSSSDLPSEDEDQISQ QIEDSNRMTIKTKEKMNNFYVERMAKLSGDRIVKNDDKIHKQNENFYQFSVKNNTDQF PQLQCNSAHILQNKTNDNCVLQAARCDAGIQTESESVMEEKLDVAIQCDLISKCTCRS DVSLCNLERCSGNIKADTTGGQEIHKNN" BASE COUNT 1021 a 444 c 519 g 817 t ORIGIN 1 aggttgggcc tcaggcggtg gaccagaagg agcttactcg ggccctgacg ttgtcaggag 61 gccctggggg atcctgctga agctgcgatt tggcgcagag ctgagatgtc tgagctctag 121 acacagggac ctcagtgtca aaagatttgg gaagatgaat tgggtcgggg ggtcccggtc 181 cagggttctg atcaagcagg aaagaagaaa gcaaaaggaa tattttgaaa aacacaggtt 241 aaaatcaaaa atgaaatcgc tgggagtttt atctcctgtc aaaaattctg ctgtcagctt 301 agacattctt aacctatata tggtaaatca gatatcttgc aagaagaaaa ttcctgaaac 361 tgtgagaaaa ccaacccatg tgaacatgaa tagagacata aaaatgcccc taagaaagca 421 taatttagaa cttacaatgt cgcctcactg tgtaccttct aaactctgcc ttgatgatac 481 agaaaccaat gtaaactgtc aaagactaag tagcaaggaa gatcttggcc cagtccagtc 541 acaaggcatg gactcatata gtatgcttca ccctcagttc agcaaaatag agaactgcag 601 tttcactcca tcatcttttt cagtggagtt accttctaac agacatattt caaaactaaa 661 tttcacatct ggaatagcac ctactcctca gaaacttgca tatgaaaaaa agcagaatga 721 ccagcgcagt actgttaact gttctgattc cttgctttcc aaattaaata aaagtcaaga 781 tgttttcagt ccatcacata aaactacacg atttgggaca ttatttgaaa gattaaacag 841 tctaggaaat aggaatttac ttactaaaag ccctgctgta attatggatg aagattgtag 901 aagcacggat gaaataagac agtcagacta cattactgaa aaacactcaa tacagcatat 961 ttgggggaaa aatggaaagg aagtttcaaa ttttcttgaa gatgtgaacc agtctactcc 1021 taaccttcta tcagagaatt gtgactcttt tgttagtcaa aatatgatca atgtattaaa 1081 catagatgag caaaggataa agaaaacatt taacaagtgt gattatgata gtatgggaga 1141 tacttgtgta gtcactagtt ctgataaaaa ccatgtcact gacagatgca ttagaaacat 1201 ttttacagtt ccagagttga cttttagtaa ttcgactttg aataaaacaa gttatccaga 1261 aaaatgtcag ccaaacaaga agtatcagag agagtataac aaaaatgaaa gaaatgatct 1321 tagtacatct tttgagaacg attactaccc aagcagctct gaaagaaaag aaaaatttga 1381 aaatgattac caagagaaga caccacagaa aagtattcag aaatatccag caaactctat 1441 gggaaatata ccttcggaag aattgcactc taagcagtca tgggactttg gacttgatga 1501 gattctgatg gaagaaggag gaatatattc tttaaaaagc aagcgaatat ctactaagaa 1561 aatctctctt gattctgcac agagtagtcg gtctactagt tactctccaa gaccaacaga 1621 cagctgtttc agttctagtt cagatttgcc atctgaagat gaagatcaaa tatcacagca 1681 aattgaagat tcaaatagga tgaccatcaa aaccaaggaa aaaatgaata atttttatgt 1741 agaaaggatg gcaaaacttt caggtgacag gattgttaaa aacgatgaca aaattcacaa 1801 acagaatgag aatttctacc agttctcagt gaaaaataat acagatcagt ttccacagtt 1861 gcagtgcaat tcagcccaca ttttgcaaaa caaaaccaat gataactgcg ttctgcaggc 1921 tgcaaggtgt gatgcaggga tacaaacaga gagtgaatct gtaatggagg aaaaattaga 1981 tgttgccata cagtgtgatc taatttcaaa atgtacatgt agaagtgatg tttctctttg 2041 caaccttgaa aggtgcagtg gaaatattaa ggcagatacc actggagggc aggaaatcca 2101 taagaacaac taatattcta aaatctctac ctaggatgta gaatttcact tgcccttaga 2161 aaacaacagt aaatgttgaa aatttcatta acatgataag aaatgagaaa aagtagctaa 2221 gcataagctg acagtgttca gggtgtatat tcacggttca tgttaaaaca ttttaatatt 2281 attaatgtat gtatttaatt tgtatatagc catttcctta atagctttgg tatatggtag 2341 agtttttaga aaataatata tttgtaaatg tactagcgtt tttatgtgat tattcagtat 2401 attacaatga tgcgctgtta tttatgggtt aaaatatgct taattgcttc cttccttgta 2461 gcatttattt taatattctt tgcagttgca ttttctggca aaaatgttcc ctttcaagat 2521 atttaagata gaaaataata cctaatatat tttatgtcct cattataata attttgttag 2581 ctacttctct ttaatattac agtcctattt aaaaattcta gcattaattt gtagataaca 2641 catatcttct atttgcataa catagttttt ttgttggtgc tattaattca aaggaaaatg 2701 ttctgtagga ttaaaagatg ttttaatgtt tttataaaat aattgtttga aattaaaaaa 2761 tgatttatgt tactaaaaaa aaaagaaaaa aaaaaaaaaa a //